| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423810
Identifier: 189423810
GI number: 189423810
Start: 752905
End: 754296
Strand: Reverse
Name: 189423810
Synonym: Glov_0741
Alternate gene names: NA
Gene position: 754296-752905 (Counterclockwise)
Preceding gene: 189423811
Following gene: 189423809
Centisome position: 19.25
GC content: 57.04
Gene sequence:
>1392_bases ATGCTGTACACGATAATCATCCGGTCAACCCTGCTTCTGCTGGTGATCAGCCTGCTGACCGGTTGCGGTGACTCTTCTTC TGCACCGGGAACAACCGTAACAACCGCCTTCGAATCAGGCAGTATCGGCACGGTTGTCAAGGTCAGTGCGACGGAATGGG AGCTGACCATTGCCGACGACAACAATAACAGCAGCCTGCCCGCAACCTGGCGCAGCTGGTGGTATGTCCGTATGGACAAT GCGGCAACACACACACCGACCACCGTTACGCTGAAGAACTCCGGCTGGATCTATTACTACCTGCCGATCTACTCCTATGA CCAGAAGACCTGGCACCGTTTTGATGAATCGGAAGTGACCCGGAACCAGAACAACGAGCTTGTGGTGCGCAAACAGTATG CACAGCCCACGGTCTGGATCGCCCGCTTTTACCCCTATACCTTCAGCGACCTTGAAAACTATCTGCGACGTATCGCAGGC AGCCCGTTTCTGGAGATTCAGGTTCCCGGTTACTCACAAAACGGTCGGCCGCTCTATCTGCTGAAGCTGACCGATCCGAA CAGCCCGGTAGCCACAAAAAAACGGATCTTCATCCATGCCCGCACCCACCCGGCGGAAACACCTCCTTCGTTCCTGCTGG AAGGGCTGATAGGCAGCCTGCTCTCCGGCAGCAATGCTGCGGCCACCCTGCTGGCACATACCGAGTTTTATATCTTTCCG ATGCACAATGTTGACGGCGTGATTGCCGGGAATTATCGCAGCACCCCCAAGTCGGAAAACCTGGAAGTCATGTGGTACCT GGACGCCGCTAACCCGATCAACCTGCGTGCCGATGTGCCGCAGGAAATTTCAGTGATCCACCGGTATGCCAAACAGCTGA TGAGCGACGGCGGGCCACCGGTAGTGATCGCCCTGAACCTGCATGCCTCCAACAGCGAGCCTGACATCCGTACCTTTTTC TATCCCCACTTCGGGACCACGGCACAGGGCTATACCGCACCGCAGGCGGCTCTGTGGAACAGCCAGATCCGCTTCATTGA TCTGCTGGCTGCCCGTTACAGCGTCGACCTGCTGGAGCCTGCCCCGGAAAACGGCGGTTCAGGTTTTGTAAATAATCCCT TTCCGGAATCCTGGTGGTGGGCCAACTTCCAGGATACGGTTATGGCCATGACCATTGAGATGACCTACGGCAGGGCCGGT TTTGCCCCCCGCTGGGTTACCCCTGATGACACCCGACAGCTTGGCACTGCACTGCTCTGGGCCATTGGCGATTATTGCAG CGGAGCCTCCGCAGCCAAAACGGCCCGCACAGTTGCTGACAACAGCACCGGCAGACAGCTGCTCTATCCGGCCTGGTATC CGCCCAATGCGGCAGATGAACTGAAATATTAG
Upstream 100 bases:
>100_bases GGTTGTAGCGGCGGCTCGATCGCAATTGTCACACCATACGCTATGATCAGGCTGTAATCGGGTATTGAGACAAGCAATAG AATCTGAAAAGGATAGAACG
Downstream 100 bases:
>100_bases CGTCAGATGGCCAAACCGGCCGGCTGTACAGCACCACCAGACACTATCGCGCACACAACGCAGCGCTATCAAAGGAGACA CGTACCATGCAAAAAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MLYTIIIRSTLLLLVISLLTGCGDSSSAPGTTVTTAFESGSIGTVVKVSATEWELTIADDNNNSSLPATWRSWWYVRMDN AATHTPTTVTLKNSGWIYYYLPIYSYDQKTWHRFDESEVTRNQNNELVVRKQYAQPTVWIARFYPYTFSDLENYLRRIAG SPFLEIQVPGYSQNGRPLYLLKLTDPNSPVATKKRIFIHARTHPAETPPSFLLEGLIGSLLSGSNAAATLLAHTEFYIFP MHNVDGVIAGNYRSTPKSENLEVMWYLDAANPINLRADVPQEISVIHRYAKQLMSDGGPPVVIALNLHASNSEPDIRTFF YPHFGTTAQGYTAPQAALWNSQIRFIDLLAARYSVDLLEPAPENGGSGFVNNPFPESWWWANFQDTVMAMTIEMTYGRAG FAPRWVTPDDTRQLGTALLWAIGDYCSGASAAKTARTVADNSTGRQLLYPAWYPPNAADELKY
Sequences:
>Translated_463_residues MLYTIIIRSTLLLLVISLLTGCGDSSSAPGTTVTTAFESGSIGTVVKVSATEWELTIADDNNNSSLPATWRSWWYVRMDN AATHTPTTVTLKNSGWIYYYLPIYSYDQKTWHRFDESEVTRNQNNELVVRKQYAQPTVWIARFYPYTFSDLENYLRRIAG SPFLEIQVPGYSQNGRPLYLLKLTDPNSPVATKKRIFIHARTHPAETPPSFLLEGLIGSLLSGSNAAATLLAHTEFYIFP MHNVDGVIAGNYRSTPKSENLEVMWYLDAANPINLRADVPQEISVIHRYAKQLMSDGGPPVVIALNLHASNSEPDIRTFF YPHFGTTAQGYTAPQAALWNSQIRFIDLLAARYSVDLLEPAPENGGSGFVNNPFPESWWWANFQDTVMAMTIEMTYGRAG FAPRWVTPDDTRQLGTALLWAIGDYCSGASAAKTARTVADNSTGRQLLYPAWYPPNAADELKY >Mature_463_residues MLYTIIIRSTLLLLVISLLTGCGDSSSAPGTTVTTAFESGSIGTVVKVSATEWELTIADDNNNSSLPATWRSWWYVRMDN AATHTPTTVTLKNSGWIYYYLPIYSYDQKTWHRFDESEVTRNQNNELVVRKQYAQPTVWIARFYPYTFSDLENYLRRIAG SPFLEIQVPGYSQNGRPLYLLKLTDPNSPVATKKRIFIHARTHPAETPPSFLLEGLIGSLLSGSNAAATLLAHTEFYIFP MHNVDGVIAGNYRSTPKSENLEVMWYLDAANPINLRADVPQEISVIHRYAKQLMSDGGPPVVIALNLHASNSEPDIRTFF YPHFGTTAQGYTAPQAALWNSQIRFIDLLAARYSVDLLEPAPENGGSGFVNNPFPESWWWANFQDTVMAMTIEMTYGRAG FAPRWVTPDDTRQLGTALLWAIGDYCSGASAAKTARTVADNSTGRQLLYPAWYPPNAADELKY
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31657119, Length=258, Percent_Identity=30.6201550387597, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI222352158, Length=254, Percent_Identity=28.3464566929134, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI190194403, Length=272, Percent_Identity=29.7794117647059, Blast_Score=86, Evalue=8e-17, Organism=Caenorhabditis elegans, GI115533904, Length=336, Percent_Identity=27.0833333333333, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI193202888, Length=282, Percent_Identity=27.6595744680851, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641847, Length=445, Percent_Identity=24.7191011235955, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI161077807, Length=445, Percent_Identity=24.7191011235955, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571179, Length=445, Percent_Identity=24.4943820224719, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641845, Length=445, Percent_Identity=24.7191011235955, Blast_Score=90, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51757; Mature: 51757
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYTIIIRSTLLLLVISLLTGCGDSSSAPGTTVTTAFESGSIGTVVKVSATEWELTIADD CEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEEEC NNNSSLPATWRSWWYVRMDNAATHTPTTVTLKNSGWIYYYLPIYSYDQKTWHRFDESEVT CCCCCCCCEEHEEEEEEECCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHCCCHHHHH RNQNNELVVRKQYAQPTVWIARFYPYTFSDLENYLRRIAGSPFLEIQVPGYSQNGRPLYL CCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEE LKLTDPNSPVATKKRIFIHARTHPAETPPSFLLEGLIGSLLSGSNAAATLLAHTEFYIFP EEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEE MHNVDGVIAGNYRSTPKSENLEVMWYLDAANPINLRADVPQEISVIHRYAKQLMSDGGPP ECCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC VVIALNLHASNSEPDIRTFFYPHFGTTAQGYTAPQAALWNSQIRFIDLLAARYSVDLLEP EEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCEEEECC APENGGSGFVNNPFPESWWWANFQDTVMAMTIEMTYGRAGFAPRWVTPDDTRQLGTALLW CCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH AIGDYCSGASAAKTARTVADNSTGRQLLYPAWYPPNAADELKY HHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCC >Mature Secondary Structure MLYTIIIRSTLLLLVISLLTGCGDSSSAPGTTVTTAFESGSIGTVVKVSATEWELTIADD CEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEEEC NNNSSLPATWRSWWYVRMDNAATHTPTTVTLKNSGWIYYYLPIYSYDQKTWHRFDESEVT CCCCCCCCEEHEEEEEEECCCCCCCCEEEEEECCCEEEEEEEEEECCCHHHHCCCHHHHH RNQNNELVVRKQYAQPTVWIARFYPYTFSDLENYLRRIAGSPFLEIQVPGYSQNGRPLYL CCCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEE LKLTDPNSPVATKKRIFIHARTHPAETPPSFLLEGLIGSLLSGSNAAATLLAHTEFYIFP EEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEE MHNVDGVIAGNYRSTPKSENLEVMWYLDAANPINLRADVPQEISVIHRYAKQLMSDGGPP ECCCCEEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC VVIALNLHASNSEPDIRTFFYPHFGTTAQGYTAPQAALWNSQIRFIDLLAARYSVDLLEP EEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCEEEECC APENGGSGFVNNPFPESWWWANFQDTVMAMTIEMTYGRAGFAPRWVTPDDTRQLGTALLW CCCCCCCCCCCCCCCCCCEECCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH AIGDYCSGASAAKTARTVADNSTGRQLLYPAWYPPNAADELKY HHHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA