| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423777
Identifier: 189423777
GI number: 189423777
Start: 722509
End: 723456
Strand: Reverse
Name: 189423777
Synonym: Glov_0708
Alternate gene names: NA
Gene position: 723456-722509 (Counterclockwise)
Preceding gene: 189423778
Following gene: 189423776
Centisome position: 18.47
GC content: 58.65
Gene sequence:
>948_bases ATGATCTTGCGCCTGTTACTGTGCACCGTACTGGCAGCAGCCATGCTCTGCCCGCCAGTTGCTTCAGCCAGGGAACGGGT TGAGATTGCCATGGTGCTCTGGCGTGGTGAGACCGAAGCAGAAAAGGGATTTCGTGAAAAACTGGCCGCATCGTCCGACT ACGAGGTGGCGGTTACGGTCTTTGACGCAAACCAGAGCAAGGAAAAACTGGACCGGATCCTGGCAGGGCTGGACCACAAA CGCTTCCGGCTGGTCTACACCTTCGGCACCATGGTAACCCAGGCGGCCCTGCAGCAGACCAGCGACATCCCGATCATCTT CAACATCGTACAGCGTCCGGTTGAAGGCAGGATCGCTGCCAGCATGGAACGTCCCGGCAACAGGGCCACCGGCGCCTCCA ACCTGGTACCGATGGACAGCGCCTTCCGCACCCTGGGCACCCTGATGAACATCCGCAAACTGGGCTTTGTCTACTCAAGT CACGATCCGGCCCCCCGCTATCAGCTGGCAGAGATCAAACAGCAACAGAAGCGGTTCGGCTTCAAGACCTTTGAGTTTCC GATCAAGGGCAAAGAGGGGATTGCCAACACCATGAAGCAGGTGATTGATGCGCGGGTTGATGCGGTGATCTTTCCTTCCG ACTCCTTTGTCAAGGCCAACGCGACCCGGATCATCGGCATCCTGAATCAGCACCGGATCCCCAGCGTGGTGGTCATACCG GAGATGGTCAGCGAAAACCGGGCCTTGATCTCGCTGGGACCGGATTACCGTACCCTGGGCCGGCTTGCAGCAGACAATGC CCTGCAGGTCCTGAAAGGGAACAAACCTGCTGATCTGCCGGTTCGTGTCGTGCCGCAACTCGCCATCATGATCAATCTTG CCACCGCAGACCGGCTGGGCATCCATATCCCGCTGCAGCTGTTGTCGGTTGCCACGGTAGTGAGGTAG
Upstream 100 bases:
>100_bases TCATCCATGCCATCCGGACCGAGGTACAGGTCTTTGCCAACGGCGCACCGCAGTCGGATGACATTACCATGCTGGCGATA CGCTACCTGGGGAAACAGGC
Downstream 100 bases:
>100_bases CCGGCATGGGAGCAGCAGCCACCGTCATTATCAGCAGTGGTGCCACCGCAGCACAGTTCCTTTCCCTGCGGATCCTGGCA ACCGCCATCATCATCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; ABC Transporter Permease; ABC Transporter; ABC Transporter Periplasmic Protein; Permease; ABC Transporter Periplasmic Component; Permease Protein; Exported Protein; ABC-Type Transport Protein Periplasmic C; ABC Transporter Permease Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MILRLLLCTVLAAAMLCPPVASARERVEIAMVLWRGETEAEKGFREKLAASSDYEVAVTVFDANQSKEKLDRILAGLDHK RFRLVYTFGTMVTQAALQQTSDIPIIFNIVQRPVEGRIAASMERPGNRATGASNLVPMDSAFRTLGTLMNIRKLGFVYSS HDPAPRYQLAEIKQQQKRFGFKTFEFPIKGKEGIANTMKQVIDARVDAVIFPSDSFVKANATRIIGILNQHRIPSVVVIP EMVSENRALISLGPDYRTLGRLAADNALQVLKGNKPADLPVRVVPQLAIMINLATADRLGIHIPLQLLSVATVVR
Sequences:
>Translated_315_residues MILRLLLCTVLAAAMLCPPVASARERVEIAMVLWRGETEAEKGFREKLAASSDYEVAVTVFDANQSKEKLDRILAGLDHK RFRLVYTFGTMVTQAALQQTSDIPIIFNIVQRPVEGRIAASMERPGNRATGASNLVPMDSAFRTLGTLMNIRKLGFVYSS HDPAPRYQLAEIKQQQKRFGFKTFEFPIKGKEGIANTMKQVIDARVDAVIFPSDSFVKANATRIIGILNQHRIPSVVVIP EMVSENRALISLGPDYRTLGRLAADNALQVLKGNKPADLPVRVVPQLAIMINLATADRLGIHIPLQLLSVATVVR >Mature_315_residues MILRLLLCTVLAAAMLCPPVASARERVEIAMVLWRGETEAEKGFREKLAASSDYEVAVTVFDANQSKEKLDRILAGLDHK RFRLVYTFGTMVTQAALQQTSDIPIIFNIVQRPVEGRIAASMERPGNRATGASNLVPMDSAFRTLGTLMNIRKLGFVYSS HDPAPRYQLAEIKQQQKRFGFKTFEFPIKGKEGIANTMKQVIDARVDAVIFPSDSFVKANATRIIGILNQHRIPSVVVIP EMVSENRALISLGPDYRTLGRLAADNALQVLKGNKPADLPVRVVPQLAIMINLATADRLGIHIPLQLLSVATVVR
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34771; Mature: 34771
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILRLLLCTVLAAAMLCPPVASARERVEIAMVLWRGETEAEKGFREKLAASSDYEVAVTV CHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE FDANQSKEKLDRILAGLDHKRFRLVYTFGTMVTQAALQQTSDIPIIFNIVQRPVEGRIAA EECCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHH SMERPGNRATGASNLVPMDSAFRTLGTLMNIRKLGFVYSSHDPAPRYQLAEIKQQQKRFG HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCC FKTFEFPIKGKEGIANTMKQVIDARVDAVIFPSDSFVKANATRIIGILNQHRIPSVVVIP CCEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEECCHHHHEEHHHCCCCCEEEEEH EMVSENRALISLGPDYRTLGRLAADNALQVLKGNKPADLPVRVVPQLAIMINLATADRLG HHHCCCCEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCEEEEEEEECCCCCC IHIPLQLLSVATVVR EEHHHHHHHHHHHCC >Mature Secondary Structure MILRLLLCTVLAAAMLCPPVASARERVEIAMVLWRGETEAEKGFREKLAASSDYEVAVTV CHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEE FDANQSKEKLDRILAGLDHKRFRLVYTFGTMVTQAALQQTSDIPIIFNIVQRPVEGRIAA EECCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHCCCCCEEHHHHCCCCCCHHHH SMERPGNRATGASNLVPMDSAFRTLGTLMNIRKLGFVYSSHDPAPRYQLAEIKQQQKRFG HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCC FKTFEFPIKGKEGIANTMKQVIDARVDAVIFPSDSFVKANATRIIGILNQHRIPSVVVIP CCEEECCCCCCCHHHHHHHHHHHHHCCEEEECCCCCEECCHHHHEEHHHCCCCCEEEEEH EMVSENRALISLGPDYRTLGRLAADNALQVLKGNKPADLPVRVVPQLAIMINLATADRLG HHHCCCCEEEEECCCHHHHHHHHHCCHHHHHCCCCCCCCCHHHHCCEEEEEEEECCCCCC IHIPLQLLSVATVVR EEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA