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The map label for this gene is ybgI [C]

Identifier: 189423752

GI number: 189423752

Start: 692624

End: 693790

Strand: Reverse

Name: ybgI [C]

Synonym: Glov_0683

Alternate gene names: 189423752

Gene position: 693790-692624 (Counterclockwise)

Preceding gene: 189423753

Following gene: 189423751

Centisome position: 17.71

GC content: 55.53

Gene sequence:

>1167_bases
ATGCACTCTTTTCATTTATACGGCATGACCAATCCAAAACTGTCAGACATAGCCGGAATCATTAACAAAAAGTACCCCTT
CCGTCTGGCTGAAGACTGGGATAACGTGGGATTACAGCTGGGTGACACAACAAAGAGCGTCACCCGCATCATGGTAGCAC
TGGATCCGCTCCCACAGGTTATTACATCCGCACTTGATCACAACTGTGATCTGCTGGTCACCCACCACCCCCTGATCTTC
TCTCCTCTCCGCCAGATCACTTCTTCAACCTCCACCGGCAACAGCCTGCTGCTGGCTGCCCAGGGTGGACTGGCCTTGCT
GGCCATGCACACCAACTATGACATAGCTACCGACGGACTGAATGACCTGTTGGCAGACAGGATCGGCCTGCAGCAAACCC
GGCCGCTCAAAATTACCAGCCGGGACGAGCTGATCAAACTGGTCGTATTTGTACCGGAAGAACAGCTTGCCACGGTACGT
TCGGCACTGCTCCCCCATGCAGAGTCCATCGGCAACTACCAGGACTGCTCCTTCAGTACCCGCGGTGAAGGCACCTTTCT
GCCCCTTGCCGGAGCAGAACCAGCTATTGGCACCATAGGTAAACAGGAAAAGGTAGCTGAGCAACGTCTGGAATTATTGC
TGAGACGTGATCAGCTTTCCAGGGCAATCCGCACCCTGCTGGCCGTACATCCCTATGAAGAGCCTGCCTTTGATTGTTAT
CCTCTGCTGAATGAAGCTGCCGCCAAAGGGCTGGGCCGGATCGGCTACCTGCCCGAACCGGTAGTGCTGGCAGACTGGGC
CGGGAGCGTAGCAAAACAGCTGGATTGTGAAACGCTCCGTTTTGTCGGCGATACTGGCCGGAGCATCCGCAAAATTGCCC
TCTGCAGCGGTAGCGGTTCATCATTGCTCCACGATGCGATCCGGGCCGGAGCAGACCTGCTGTTGACCGGCGACCTGAAG
TATCACGAAGCCCGTGAAGCAGAGGCACAAGGGATAGCACTGCTGGACGCCGGTCACTTTGGCACCGAGATCCTCATGGT
GGCTGCCATACAGGAGTTTCTGGGCAACGCCCTCGCCCAGGCCGGCCATTCTGTTGAAATCATCAGGGCCGAATGTGAGC
AGAATCCATTCAGAACCTTTATCAGCCGCACAGCAGAAGTCATTTAA

Upstream 100 bases:

>100_bases
CCCACCATATCAACTTCCCCAGCAGAGGTTTAGACCGGATGCGGTCAGTCAGTTACCGATCAATTACGACCATAGGTCAA
AAAGAGTGCATCTCACAGGG

Downstream 100 bases:

>100_bases
CCAAGGAGACAGAAGTGAAAAAGAAACTCGACTTATTGGAAGAGCTACAAGGCATTGATCAAACCATCGCCGAAAAGAAG
GCGGAACAGGCAGTACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MHSFHLYGMTNPKLSDIAGIINKKYPFRLAEDWDNVGLQLGDTTKSVTRIMVALDPLPQVITSALDHNCDLLVTHHPLIF
SPLRQITSSTSTGNSLLLAAQGGLALLAMHTNYDIATDGLNDLLADRIGLQQTRPLKITSRDELIKLVVFVPEEQLATVR
SALLPHAESIGNYQDCSFSTRGEGTFLPLAGAEPAIGTIGKQEKVAEQRLELLLRRDQLSRAIRTLLAVHPYEEPAFDCY
PLLNEAAAKGLGRIGYLPEPVVLADWAGSVAKQLDCETLRFVGDTGRSIRKIALCSGSGSSLLHDAIRAGADLLLTGDLK
YHEAREAEAQGIALLDAGHFGTEILMVAAIQEFLGNALAQAGHSVEIIRAECEQNPFRTFISRTAEVI

Sequences:

>Translated_388_residues
MHSFHLYGMTNPKLSDIAGIINKKYPFRLAEDWDNVGLQLGDTTKSVTRIMVALDPLPQVITSALDHNCDLLVTHHPLIF
SPLRQITSSTSTGNSLLLAAQGGLALLAMHTNYDIATDGLNDLLADRIGLQQTRPLKITSRDELIKLVVFVPEEQLATVR
SALLPHAESIGNYQDCSFSTRGEGTFLPLAGAEPAIGTIGKQEKVAEQRLELLLRRDQLSRAIRTLLAVHPYEEPAFDCY
PLLNEAAAKGLGRIGYLPEPVVLADWAGSVAKQLDCETLRFVGDTGRSIRKIALCSGSGSSLLHDAIRAGADLLLTGDLK
YHEAREAEAQGIALLDAGHFGTEILMVAAIQEFLGNALAQAGHSVEIIRAECEQNPFRTFISRTAEVI
>Mature_388_residues
MHSFHLYGMTNPKLSDIAGIINKKYPFRLAEDWDNVGLQLGDTTKSVTRIMVALDPLPQVITSALDHNCDLLVTHHPLIF
SPLRQITSSTSTGNSLLLAAQGGLALLAMHTNYDIATDGLNDLLADRIGLQQTRPLKITSRDELIKLVVFVPEEQLATVR
SALLPHAESIGNYQDCSFSTRGEGTFLPLAGAEPAIGTIGKQEKVAEQRLELLLRRDQLSRAIRTLLAVHPYEEPAFDCY
PLLNEAAAKGLGRIGYLPEPVVLADWAGSVAKQLDCETLRFVGDTGRSIRKIALCSGSGSSLLHDAIRAGADLLLTGDLK
YHEAREAEAQGIALLDAGHFGTEILMVAAIQEFLGNALAQAGHSVEIIRAECEQNPFRTFISRTAEVI

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Homo sapiens, GI215272360, Length=370, Percent_Identity=26.4864864864865, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI56605983, Length=370, Percent_Identity=26.4864864864865, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI209862879, Length=370, Percent_Identity=26.4864864864865, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI215272362, Length=109, Percent_Identity=32.1100917431193, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19921430, Length=126, Percent_Identity=30.952380952381, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 42134; Mature: 42134

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSFHLYGMTNPKLSDIAGIINKKYPFRLAEDWDNVGLQLGDTTKSVTRIMVALDPLPQV
CCCEEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHH
ITSALDHNCDLLVTHHPLIFSPLRQITSSTSTGNSLLLAAQGGLALLAMHTNYDIATDGL
HHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEECCCH
NDLLADRIGLQQTRPLKITSRDELIKLVVFVPEEQLATVRSALLPHAESIGNYQDCSFST
HHHHHHHHCCCCCCCEEEECHHHEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCCCC
RGEGTFLPLAGAEPAIGTIGKQEKVAEQRLELLLRRDQLSRAIRTLLAVHPYEEPAFDCY
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
PLLNEAAAKGLGRIGYLPEPVVLADWAGSVAKQLDCETLRFVGDTGRSIRKIALCSGSGS
HHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCH
SLLHDAIRAGADLLLTGDLKYHEAREAEAQGIALLDAGHFGTEILMVAAIQEFLGNALAQ
HHHHHHHHCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AGHSVEIIRAECEQNPFRTFISRTAEVI
CCCCEEEEEEHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MHSFHLYGMTNPKLSDIAGIINKKYPFRLAEDWDNVGLQLGDTTKSVTRIMVALDPLPQV
CCCEEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCEEECCCHHHHHHHHHHHCCHHHH
ITSALDHNCDLLVTHHPLIFSPLRQITSSTSTGNSLLLAAQGGLALLAMHTNYDIATDGL
HHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCEECCCH
NDLLADRIGLQQTRPLKITSRDELIKLVVFVPEEQLATVRSALLPHAESIGNYQDCSFST
HHHHHHHHCCCCCCCEEEECHHHEEEEEEECCHHHHHHHHHHHCCCHHHCCCCCCCCCCC
RGEGTFLPLAGAEPAIGTIGKQEKVAEQRLELLLRRDQLSRAIRTLLAVHPYEEPAFDCY
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
PLLNEAAAKGLGRIGYLPEPVVLADWAGSVAKQLDCETLRFVGDTGRSIRKIALCSGSGS
HHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECCCCH
SLLHDAIRAGADLLLTGDLKYHEAREAEAQGIALLDAGHFGTEILMVAAIQEFLGNALAQ
HHHHHHHHCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AGHSVEIIRAECEQNPFRTFISRTAEVI
CCCCEEEEEEHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]