| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189423726
Identifier: 189423726
GI number: 189423726
Start: 661220
End: 662053
Strand: Reverse
Name: 189423726
Synonym: Glov_0657
Alternate gene names: NA
Gene position: 662053-661220 (Counterclockwise)
Preceding gene: 189423727
Following gene: 189423725
Centisome position: 16.9
GC content: 62.71
Gene sequence:
>834_bases ATGAAGAACCCCTTAACCCTTGGATTTTCCCCTTGTCCCAACGACACCTTCATGTTCTATCCGCTGGTGCATGGCCTGGT GGATACCGGCGGCTACAGCTTCAACGAGCGGCTGGAGGATGTGGAGACCCTCAACCGGCTGGCCGTGAAAGGGGTACTGG ATGTGACCAAGGTCTCCTATGCCGCCCTGGGGCACTTCCGCGAACAGTACGCCCTGCTGCGGGCCGGCAGCGCCCTGGGG CGCGGCTGCGGGCCGCTGCTGGTGGCTAAGGAACCGCTTGATCCTGCTGCGCTGCAGGGCAAGACCATTGCCATTCCGGG CCGCTACACCACGGCCCACCTGCTGATGCGTCTGTATGCCCCCGGTCTGACCACCTTTCTGGAGATGCCGTTCCATGAGA TCATGGATGCGGTCATGACCGGGCGGGCCGACGCCGGGGTGATCATCCACGAATCCCGCTTTACCTATCAGGGCTTTGGC CTGCACCAGCTGGTGGATCTGGGAGAGTGGTGGGAGAACGAGACCGGCCTGCCGATCCCCCTGGGCGGGATTGTGGCCAA ACGCAGCCTGGGGGCTGACACCATCCGCGCCATTGAACAAGCCCTGGCCGATGGTGTGGAGTATGCCCGTAACAATCCTG CGGCAGCCACCCAATATATCCGGGAGCATGCCCAGGAGATGAATGAACAGGTCTGCGCTGCCCATATCGGGCTGTATGTC AATGACTTCTCGCAGCAGTTGGGAGCAGAGGGAGAGCAGGCCATTGCCGAGCTGCTGCGCCGGGCTGAGGCGGCCGGGCT GGTACCTGCATCGGAGGCGCCGCTATTCATCTAG
Upstream 100 bases:
>100_bases CTCATCACTGGATCGGGTATTGACCCGGATGATGAGAGAAGCAAAAAAACAGTAACTTAAATTGATGGAACGACAAACCA TCTGGAACTCCGGAGCACCT
Downstream 100 bases:
>100_bases TTCCGATTCCATTTCAAGGCCCTCTCTTCGTTGGCTCGTCATCGGCTCCTCAACGTACTGCGTGTACGCCTGCGTCGCCG AATTCCTCGCCGCCTTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKNPLTLGFSPCPNDTFMFYPLVHGLVDTGGYSFNERLEDVETLNRLAVKGVLDVTKVSYAALGHFREQYALLRAGSALG RGCGPLLVAKEPLDPAALQGKTIAIPGRYTTAHLLMRLYAPGLTTFLEMPFHEIMDAVMTGRADAGVIIHESRFTYQGFG LHQLVDLGEWWENETGLPIPLGGIVAKRSLGADTIRAIEQALADGVEYARNNPAAATQYIREHAQEMNEQVCAAHIGLYV NDFSQQLGAEGEQAIAELLRRAEAAGLVPASEAPLFI
Sequences:
>Translated_277_residues MKNPLTLGFSPCPNDTFMFYPLVHGLVDTGGYSFNERLEDVETLNRLAVKGVLDVTKVSYAALGHFREQYALLRAGSALG RGCGPLLVAKEPLDPAALQGKTIAIPGRYTTAHLLMRLYAPGLTTFLEMPFHEIMDAVMTGRADAGVIIHESRFTYQGFG LHQLVDLGEWWENETGLPIPLGGIVAKRSLGADTIRAIEQALADGVEYARNNPAAATQYIREHAQEMNEQVCAAHIGLYV NDFSQQLGAEGEQAIAELLRRAEAAGLVPASEAPLFI >Mature_277_residues MKNPLTLGFSPCPNDTFMFYPLVHGLVDTGGYSFNERLEDVETLNRLAVKGVLDVTKVSYAALGHFREQYALLRAGSALG RGCGPLLVAKEPLDPAALQGKTIAIPGRYTTAHLLMRLYAPGLTTFLEMPFHEIMDAVMTGRADAGVIIHESRFTYQGFG LHQLVDLGEWWENETGLPIPLGGIVAKRSLGADTIRAIEQALADGVEYARNNPAAATQYIREHAQEMNEQVCAAHIGLYV NDFSQQLGAEGEQAIAELLRRAEAAGLVPASEAPLFI
Specific function: Unknown
COG id: COG2107
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30095; Mature: 30095
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPLTLGFSPCPNDTFMFYPLVHGLVDTGGYSFNERLEDVETLNRLAVKGVLDVTKVSY CCCCCEECCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALGHFREQYALLRAGSALGRGCGPLLVAKEPLDPAALQGKTIAIPGRYTTAHLLMRLYA HHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCCCHHHHCCCEEEECCCHHHHHHHHHHHC PGLTTFLEMPFHEIMDAVMTGRADAGVIIHESRFTYQGFGLHQLVDLGEWWENETGLPIP CCHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHCCCCCCCCC LGGIVAKRSLGADTIRAIEQALADGVEYARNNPAAATQYIREHAQEMNEQVCAAHIGLYV CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDFSQQLGAEGEQAIAELLRRAEAAGLVPASEAPLFI HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKNPLTLGFSPCPNDTFMFYPLVHGLVDTGGYSFNERLEDVETLNRLAVKGVLDVTKVSY CCCCCEECCCCCCCCCEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALGHFREQYALLRAGSALGRGCGPLLVAKEPLDPAALQGKTIAIPGRYTTAHLLMRLYA HHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCCCHHHHCCCEEEECCCHHHHHHHHHHHC PGLTTFLEMPFHEIMDAVMTGRADAGVIIHESRFTYQGFGLHQLVDLGEWWENETGLPIP CCHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCCEECCCCHHHHHHHHHHHCCCCCCCCC LGGIVAKRSLGADTIRAIEQALADGVEYARNNPAAATQYIREHAQEMNEQVCAAHIGLYV CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDFSQQLGAEGEQAIAELLRRAEAAGLVPASEAPLFI HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA