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The map label for this gene is fixA [H]

Identifier: 189423642

GI number: 189423642

Start: 553330

End: 554145

Strand: Reverse

Name: fixA [H]

Synonym: Glov_0572

Alternate gene names: 189423642

Gene position: 554145-553330 (Counterclockwise)

Preceding gene: 189423645

Following gene: 189423641

Centisome position: 14.14

GC content: 59.31

Gene sequence:

>816_bases
ATGTTGATAGTAGCCTGTATCAAACAAGTCCCTGATACGACCCAAGTCAAGATAGACCCGGTTACCAACACCCTGATACG
TGAAGGGATCCCCTTCATCATGAACCCCTACGATACCCACGCCATGGAAGCCGCGCTGCAACTGAAAGACCAGTTCGGCT
GCCGGGTTGCAGTGCTTTCCATGGGACCACCCAACGCAGAGGCAACCCTGCGCAAGGCGCTGTCTGCCGGCGTTGATCGT
GCCATCCTGCTGTCCGACCGCGTCTTTGGCGGGGCCGACACCCTGGCCACCAGCAAGGTGCTGGCAGCAGCCATAGCCAA
GCTGAATGCGGAGGTTGAACCGGTGGGGCTGGTCATCTGCGGCAAGCAGACCATTGACGGCGACACCGCACAGGTCGGCC
CGGGCATTGCCGTCCGCCTGGGCTACCAACAACTGACCCTGGTGGACAAGGTGGAAGAACTGGACCTGACCAATAAGAAG
CTGGTGGTCAGCCGCAAGCTGGAAGGCCGGCATGAGCGGGTGCAGGCGCCCCTGCCGGCCATGCTGACCGTCGTGCGGGA
ACTGAACCGTCCCCGCTATCCCACCGTACCGATGCGCCTGGCTGCTGCGACCGCAGAGGTTGAGGTCTGGAATAACGAAG
TATTGCAACTCGATCCCCAGACCATTGGTCTGAAGGGCTCCCCCACCTGGGTATCCAAGATCTTCTCACCGGAACGCGAC
AAGGGTGAAATTGTAGGGGACGGCTATGCCGATCCGGAGGGAACGGTTGATTTATTGCTGGGTAAACTGATGGAAAAGGA
TCTGCTACCACTATGA

Upstream 100 bases:

>100_bases
CTTGCATGATTTTTTTTGATGCAGTATGTAGATCTGCTATTGTTTAAAATTTTGACACATACCACAAAATGCCTTGTTTT
TTGGCACAAAGAGGAATCAC

Downstream 100 bases:

>100_bases
GTGAAAACACACCAAAGATCAAAAAACCCCGCGGACGCGCCCGCCTGCTGGAAGGCAAGTGTATTGCCTGCGGCGCCCGC
TGTGAAAGTTCCTGCCCGGT

Product: electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLIVACIKQVPDTTQVKIDPVTNTLIREGIPFIMNPYDTHAMEAALQLKDQFGCRVAVLSMGPPNAEATLRKALSAGVDR
AILLSDRVFGGADTLATSKVLAAAIAKLNAEVEPVGLVICGKQTIDGDTAQVGPGIAVRLGYQQLTLVDKVEELDLTNKK
LVVSRKLEGRHERVQAPLPAMLTVVRELNRPRYPTVPMRLAAATAEVEVWNNEVLQLDPQTIGLKGSPTWVSKIFSPERD
KGEIVGDGYADPEGTVDLLLGKLMEKDLLPL

Sequences:

>Translated_271_residues
MLIVACIKQVPDTTQVKIDPVTNTLIREGIPFIMNPYDTHAMEAALQLKDQFGCRVAVLSMGPPNAEATLRKALSAGVDR
AILLSDRVFGGADTLATSKVLAAAIAKLNAEVEPVGLVICGKQTIDGDTAQVGPGIAVRLGYQQLTLVDKVEELDLTNKK
LVVSRKLEGRHERVQAPLPAMLTVVRELNRPRYPTVPMRLAAATAEVEVWNNEVLQLDPQTIGLKGSPTWVSKIFSPERD
KGEIVGDGYADPEGTVDLLLGKLMEKDLLPL
>Mature_271_residues
MLIVACIKQVPDTTQVKIDPVTNTLIREGIPFIMNPYDTHAMEAALQLKDQFGCRVAVLSMGPPNAEATLRKALSAGVDR
AILLSDRVFGGADTLATSKVLAAAIAKLNAEVEPVGLVICGKQTIDGDTAQVGPGIAVRLGYQQLTLVDKVEELDLTNKK
LVVSRKLEGRHERVQAPLPAMLTVVRELNRPRYPTVPMRLAAATAEVEVWNNEVLQLDPQTIGLKGSPTWVSKIFSPERD
KGEIVGDGYADPEGTVDLLLGKLMEKDLLPL

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI62420877, Length=196, Percent_Identity=35.7142857142857, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4503609, Length=209, Percent_Identity=34.4497607655502, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI87081682, Length=256, Percent_Identity=31.25, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367123, Length=211, Percent_Identity=30.3317535545024, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=201, Percent_Identity=30.8457711442786, Blast_Score=95, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6321646, Length=183, Percent_Identity=32.7868852459016, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24651147, Length=199, Percent_Identity=31.6582914572864, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24651145, Length=199, Percent_Identity=31.6582914572864, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29307; Mature: 29307

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVACIKQVPDTTQVKIDPVTNTLIREGIPFIMNPYDTHAMEAALQLKDQFGCRVAVLS
CEEEEEHHHCCCCCEEEECHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEE
MGPPNAEATLRKALSAGVDRAILLSDRVFGGADTLATSKVLAAAIAKLNAEVEPVGLVIC
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
GKQTIDGDTAQVGPGIAVRLGYQQLTLVDKVEELDLTNKKLVVSRKLEGRHERVQAPLPA
CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCHHH
MLTVVRELNRPRYPTVPMRLAAATAEVEVWNNEVLQLDPQTIGLKGSPTWVSKIFSPERD
HHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCCEEEECCCEECCCCCHHHHHHHCCCCCC
KGEIVGDGYADPEGTVDLLLGKLMEKDLLPL
CCCEEECCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLIVACIKQVPDTTQVKIDPVTNTLIREGIPFIMNPYDTHAMEAALQLKDQFGCRVAVLS
CEEEEEHHHCCCCCEEEECHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEE
MGPPNAEATLRKALSAGVDRAILLSDRVFGGADTLATSKVLAAAIAKLNAEVEPVGLVIC
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
GKQTIDGDTAQVGPGIAVRLGYQQLTLVDKVEELDLTNKKLVVSRKLEGRHERVQAPLPA
CCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCHHH
MLTVVRELNRPRYPTVPMRLAAATAEVEVWNNEVLQLDPQTIGLKGSPTWVSKIFSPERD
HHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCCEEEECCCEECCCCCHHHHHHHCCCCCC
KGEIVGDGYADPEGTVDLLLGKLMEKDLLPL
CCCEEECCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA