| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is ygjT [C]
Identifier: 189423621
GI number: 189423621
Start: 520954
End: 521892
Strand: Reverse
Name: ygjT [C]
Synonym: Glov_0550
Alternate gene names: 189423621
Gene position: 521892-520954 (Counterclockwise)
Preceding gene: 189423622
Following gene: 189423620
Centisome position: 13.32
GC content: 54.53
Gene sequence:
>939_bases ATGTCACCTACCACCATCATGTGGATCGTCTTTGCAGCCCTGATCAGCTTTATGCTGGTCATAGACCTGAGCCTGAACCG CAAGAGCGGCCGGGTCAGCTTCAAAAAAGCAGCCACCTGGACCGTGGTCTGGATGCTTCTGGCTCTGCTGTTCGGTGGCG GAATCTGGTACACCATGGGCCAGCAGAAGGCACTGGAGTTTCTGACCGGCTACCTGATTGAACAGTCGCTCTCAGTGGAC AACCTGTTTGTCTTCATCATGATCTTCACGGTCTTCGGGGTACGGGGTGAACTGCAGGCCAAGGTTTTGAAATGGGGTAT TCTGGGTGCCATCGTAATGCGGCTGGTCTTCATCTTCATCGGCGCAGCACTGCTGAAAGAGTTCCAATGGCTTTTCTATA TCTTTGGCGCACTACTGGTCTACACCGCCTGGAAGATGGCCTTCAGCGGCGATGACGAGATTGAGCCGGACAAGAACCCG CTGGTCAAGCTGGCCCGCCGCTTCCTGCCGATGACCAAGCGGATCCGTGGCGACTGGTTTATTACCCGTCGCATGCAGCT CTGGATTGCCAGTCCACTCTTCATGGTACTGCTGGTGGTGGAGAGCAGCGACCTGGTCTTTGCCATGGACTCGATTCCGG CCATCTTTGCCATTACCCTGGACCCGTTTATCGTACTGACCTCCAACGTCTTTGCCATCATGGGACTCAGATCGCTCTTC TTTCTGCTCTCGAACCTGATGGGGATGTTTGCCTACCTGAAGTTCGGCATCGCCCTGATCCTGGCCTTTGTGGGGGTCAA GATGATCCTGATGATGCTGGGGTTCCATATTCCGATCAGTCTGTCACTGGCAGTGATTGTGGTGACCCTGGCGATCGCAG TGGTTGCCTCACTACTTTTACGGAAACCGGAAACCGATGAGTTGCTGGAAACAGCTTGA
Upstream 100 bases:
>100_bases GCTGGATTCACCGCACTGCCGGCTTCATGTTTCTGGTGTTTGGCGTTGCCATGGGCTGGCGCCTGTTCTCACTCTAAACA GTTGTTGTAAAGGAACTACC
Downstream 100 bases:
>100_bases CAAACAGTACGCCAATTCCCTACTGTAACGGTATGCTACAAACACGTATCCGCATAATCAGCACAACCCTGTTGAGCATA CTGGCACTGGCAACGATCCT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVD NLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNP LVKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA
Sequences:
>Translated_312_residues MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVD NLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNP LVKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA >Mature_311_residues SPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMGQQKALEFLTGYLIEQSLSVDN LFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFIGAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPL VKLARRFLPMTKRIRGDWFITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLFF LLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLLRKPETDELLETA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=293, Percent_Identity=47.7815699658703, Blast_Score=263, Evalue=1e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35157; Mature: 35026
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC QQKALEFLTGYLIEQSLSVDNLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPLVKLARRFLPMTKRIRGDWF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH ITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RKPETDELLETA CCCCHHHHHHCC >Mature Secondary Structure SPTTIMWIVFAALISFMLVIDLSLNRKSGRVSFKKAATWTVVWMLLALLFGGGIWYTMG CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECC QQKALEFLTGYLIEQSLSVDNLFVFIMIFTVFGVRGELQAKVLKWGILGAIVMRLVFIFI HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GAALLKEFQWLFYIFGALLVYTAWKMAFSGDDEIEPDKNPLVKLARRFLPMTKRIRGDWF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHH ITRRMQLWIASPLFMVLLVVESSDLVFAMDSIPAIFAITLDPFIVLTSNVFAIMGLRSLF HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEHHCHHHHHHHHHHHHHHHHHHH FLLSNLMGMFAYLKFGIALILAFVGVKMILMMLGFHIPISLSLAVIVVTLAIAVVASLLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH RKPETDELLETA CCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA