| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is ygiX [C]
Identifier: 189423583
GI number: 189423583
Start: 486012
End: 486401
Strand: Reverse
Name: ygiX [C]
Synonym: Glov_0512
Alternate gene names: 189423583
Gene position: 486401-486012 (Counterclockwise)
Preceding gene: 189423584
Following gene: 189423582
Centisome position: 12.42
GC content: 52.56
Gene sequence:
>390_bases ATGGGAAAAATTCTGTTGATAGATGATGATCCAGCCTTTACCCGCCTGTTGGGAGAGTATATTGCCGAACAGTACCCCCT GCTCTCGGTGGATGTCTGCAACAACCCCCTTGAAGCGCTGACCGCCATCCGCCGCGCCCCCTATGACCTGATCCTGATTG ACTTTGAAATGCCCACCCTTGATGGACGTAAACTGATGAATTTTGCCGTGCAGTCCGGCATCGAAAAAAACAGGATTGTG ATCCTCTCCAGCCGGGATGCCGACTTTCTGCATGAGCAGTGCCCCATGGGCAGTTGCCTTGCCGTTCTCAACAAACATGA AGTACGCCAGAAGGCGGTGCTGGACATGATCTTCAGCTCCTTGAGCAAGAAGGCAGTTCAGGGAAACTGA
Upstream 100 bases:
>100_bases CACGGTCGGGATCATACTCTGGATCAGCTGGGTTATCCGGAGGCAGCGGGAGCAGTTCACGAATCACTCTCCCTACCTGT TCTGACATACTGAGGACGCA
Downstream 100 bases:
>100_bases GCGGCCATGCGCCACCTGTTTTTGACCGGCCTGGTGCTGGTCTTCATCATCTGGCTGCTGCGGCGCAAGGTCTCCATGGC CGCTGTAATGCCGATCGGCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Domain-Containing Protein; Response Regulator
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGKILLIDDDPAFTRLLGEYIAEQYPLLSVDVCNNPLEALTAIRRAPYDLILIDFEMPTLDGRKLMNFAVQSGIEKNRIV ILSSRDADFLHEQCPMGSCLAVLNKHEVRQKAVLDMIFSSLSKKAVQGN
Sequences:
>Translated_129_residues MGKILLIDDDPAFTRLLGEYIAEQYPLLSVDVCNNPLEALTAIRRAPYDLILIDFEMPTLDGRKLMNFAVQSGIEKNRIV ILSSRDADFLHEQCPMGSCLAVLNKHEVRQKAVLDMIFSSLSKKAVQGN >Mature_128_residues GKILLIDDDPAFTRLLGEYIAEQYPLLSVDVCNNPLEALTAIRRAPYDLILIDFEMPTLDGRKLMNFAVQSGIEKNRIVI LSSRDADFLHEQCPMGSCLAVLNKHEVRQKAVLDMIFSSLSKKAVQGN
Specific function: Probable Member Of A Two-Component Regulatory System Ygix/Ygiy. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14451; Mature: 14320
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKILLIDDDPAFTRLLGEYIAEQYPLLSVDVCNNPLEALTAIRRAPYDLILIDFEMPTL CCEEEEEECCHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHCCCEEEEEEECCCCC DGRKLMNFAVQSGIEKNRIVILSSRDADFLHEQCPMGSCLAVLNKHEVRQKAVLDMIFSS CHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSKKAVQGN HHHHHCCCC >Mature Secondary Structure GKILLIDDDPAFTRLLGEYIAEQYPLLSVDVCNNPLEALTAIRRAPYDLILIDFEMPTL CEEEEEECCHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHHHHHHCCCEEEEEEECCCCC DGRKLMNFAVQSGIEKNRIVILSSRDADFLHEQCPMGSCLAVLNKHEVRQKAVLDMIFSS CHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LSKKAVQGN HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA