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The map label for this gene is elbB [H]

Identifier: 189423557

GI number: 189423557

Start: 462374

End: 463027

Strand: Reverse

Name: elbB [H]

Synonym: Glov_0486

Alternate gene names: 189423557

Gene position: 463027-462374 (Counterclockwise)

Preceding gene: 189423558

Following gene: 189423555

Centisome position: 11.82

GC content: 57.95

Gene sequence:

>654_bases
ATGAAAAAGATCGGAGTGATACTTTCAGGTTGCGGTTTCCGTGACGGCAGTGAGATCCATGAGGCGGTCTGTGCTCTTTT
GGCCATTGACCAGGCCGGTGCCGAGGCGGTCTGCATGGCCCCGGACATAGAGTTGAATGAGATGAACCACTGCAGCATGG
AGCTGACCGGAGCCAAACGCAGGGTGCTGGTGGAATCAGCCCGGATTGCCCGCGGCAAGATCAGGAACATCAGCGAGGTA
CAGGCGGCTGAGCTGGATGCCCTGGTCCTCCCCGGCGGTTTTGGCGCTGCCCTGAACCTGTGCGACTTTGGCCAGAAAGG
TGCTGCTGCCTCGGTTAACCCGGAAGTGGCCCGCCTGACACAGGAGATCCATGCTGCCGGGAAGCCGATCGGCGCCATCT
GTATTGCACCGGCACTGATCGCCGCCATCCTGGGTAAAAAGGCACACCCAACTCTGACCATCGGCACCGACCCAGGTACC
GCTGCAGAGGTCGAAAAAACCGGCGCAAAACATCAGGATTGCCCGGTAAACGAGATTGTGATTGATCAGGCTAACAGAAT
TGTGAGTACACCGGCATACATGCTGGCAGAGCGGATTTCCGAGGTGTATGAAGGGATCGGGAAGTGCGTTAAGACCGTGG
TTGAGATGGCGTAG

Upstream 100 bases:

>100_bases
GCCGGGACACCCGGATCCGGGAATTGCTGCCGATCCGGCTGACCCCCTACGACGACGCCATACGAACGGCCCTGGCCGAA
CAACATGCAGGAGGTTCTTT

Downstream 100 bases:

>100_bases
CGAGCAAACATGAGAGGGGTGCCAACCAGTGGCACCCCTCTCATGTTTCAAACAGGCTGCTTACTTGGAGTAAAGCACTG
CAACAATCCGGGCTTTTTGA

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKIGVILSGCGFRDGSEIHEAVCALLAIDQAGAEAVCMAPDIELNEMNHCSMELTGAKRRVLVESARIARGKIRNISEV
QAAELDALVLPGGFGAALNLCDFGQKGAAASVNPEVARLTQEIHAAGKPIGAICIAPALIAAILGKKAHPTLTIGTDPGT
AAEVEKTGAKHQDCPVNEIVIDQANRIVSTPAYMLAERISEVYEGIGKCVKTVVEMA

Sequences:

>Translated_217_residues
MKKIGVILSGCGFRDGSEIHEAVCALLAIDQAGAEAVCMAPDIELNEMNHCSMELTGAKRRVLVESARIARGKIRNISEV
QAAELDALVLPGGFGAALNLCDFGQKGAAASVNPEVARLTQEIHAAGKPIGAICIAPALIAAILGKKAHPTLTIGTDPGT
AAEVEKTGAKHQDCPVNEIVIDQANRIVSTPAYMLAERISEVYEGIGKCVKTVVEMA
>Mature_217_residues
MKKIGVILSGCGFRDGSEIHEAVCALLAIDQAGAEAVCMAPDIELNEMNHCSMELTGAKRRVLVESARIARGKIRNISEV
QAAELDALVLPGGFGAALNLCDFGQKGAAASVNPEVARLTQEIHAAGKPIGAICIAPALIAAILGKKAHPTLTIGTDPGT
AAEVEKTGAKHQDCPVNEIVIDQANRIVSTPAYMLAERISEVYEGIGKCVKTVVEMA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=222, Percent_Identity=42.7927927927928, Blast_Score=166, Evalue=2e-41,
Organism=Homo sapiens, GI296531408, Length=222, Percent_Identity=36.036036036036, Blast_Score=122, Evalue=2e-28,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=53.6697247706422, Blast_Score=225, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22638; Mature: 22638

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVILSGCGFRDGSEIHEAVCALLAIDQAGAEAVCMAPDIELNEMNHCSMELTGAKR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCCHH
RVLVESARIARGKIRNISEVQAAELDALVLPGGFGAALNLCDFGQKGAAASVNPEVARLT
HHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
QEIHAAGKPIGAICIAPALIAAILGKKAHPTLTIGTDPGTAAEVEKTGAKHQDCPVNEIV
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHH
IDQANRIVSTPAYMLAERISEVYEGIGKCVKTVVEMA
HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVILSGCGFRDGSEIHEAVCALLAIDQAGAEAVCMAPDIELNEMNHCSMELTGAKR
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCCHH
RVLVESARIARGKIRNISEVQAAELDALVLPGGFGAALNLCDFGQKGAAASVNPEVARLT
HHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHH
QEIHAAGKPIGAICIAPALIAAILGKKAHPTLTIGTDPGTAAEVEKTGAKHQDCPVNEIV
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCHHHH
IDQANRIVSTPAYMLAERISEVYEGIGKCVKTVVEMA
HHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]