| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
Click here to switch to the map view.
The map label for this gene is yggT [C]
Identifier: 189423486
GI number: 189423486
Start: 396089
End: 396412
Strand: Reverse
Name: yggT [C]
Synonym: Glov_0415
Alternate gene names: 189423486
Gene position: 396412-396089 (Counterclockwise)
Preceding gene: 189423491
Following gene: 189423485
Centisome position: 10.12
GC content: 54.01
Gene sequence:
>324_bases ATGATCCTTTTCGGCAATATTCTGTATGCACTGGCCAAGATTGTTGAGCTGGCTGACGGGCTGCTGACGGTCTACAAATA TATCCTGATTGCAGCTGCCCTGATCACCTGGGTCAACCCCGATCCCTATAACCCGATTGTGAGCTTTCTGTACCGGGTGA CTGAACCGCTGCTCTCCCGCATCCGCCGCAGGATGCCCGCCATGGGACCGGTGGATCTCTCGCCGCTGGTGGCCTTTGCC CTGATCTATGTGGTGCAGATTGTCGTGTTGAACACCCTGTACCAGTACCTGATCAACTACAGCATGATCCTGAAACTGAG GTAA
Upstream 100 bases:
>100_bases ACAAGGGTGTCGACAGCACCGTAAACCAAGAGAGCTTTTGACTTTCCCAAACGATTGCTGCATAGTGCAAGGCTATGAAG TTTGGGAGGTTACTGACACC
Downstream 100 bases:
>100_bases TACCCCATGACCATTACCCCCCTCGATATACGGCAGCAGCAGTTTAAGGGCAAGATGCTGGGCGGCCTTGATCCTGACGA TGTGGACAGCTTTCTGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: YGGT Family Protein; Integral Membrane Protein
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MILFGNILYALAKIVELADGLLTVYKYILIAAALITWVNPDPYNPIVSFLYRVTEPLLSRIRRRMPAMGPVDLSPLVAFA LIYVVQIVVLNTLYQYLINYSMILKLR
Sequences:
>Translated_107_residues MILFGNILYALAKIVELADGLLTVYKYILIAAALITWVNPDPYNPIVSFLYRVTEPLLSRIRRRMPAMGPVDLSPLVAFA LIYVVQIVVLNTLYQYLINYSMILKLR >Mature_107_residues MILFGNILYALAKIVELADGLLTVYKYILIAAALITWVNPDPYNPIVSFLYRVTEPLLSRIRRRMPAMGPVDLSPLVAFA LIYVVQIVVLNTLYQYLINYSMILKLR
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12233; Mature: 12233
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFGNILYALAKIVELADGLLTVYKYILIAAALITWVNPDPYNPIVSFLYRVTEPLLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IRRRMPAMGPVDLSPLVAFALIYVVQIVVLNTLYQYLINYSMILKLR HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILFGNILYALAKIVELADGLLTVYKYILIAAALITWVNPDPYNPIVSFLYRVTEPLLSR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IRRRMPAMGPVDLSPLVAFALIYVVQIVVLNTLYQYLINYSMILKLR HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA