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The map label for this gene is yqaA [H]

Identifier: 189423452

GI number: 189423452

Start: 354675

End: 355163

Strand: Reverse

Name: yqaA [H]

Synonym: Glov_0381

Alternate gene names: 189423452

Gene position: 355163-354675 (Counterclockwise)

Preceding gene: 189423470

Following gene: 189423451

Centisome position: 9.07

GC content: 61.55

Gene sequence:

>489_bases
GTGGATCTCTTTGACAACGGCTTTCTGACATATCTGGTCCCTCTGCTGAACTGGTTGCAGCAGCCCGGCTATCCGGCCCT
GTTCGCTCTCAGCTTTCTGGCATCGACCCTGGTACCGCTGGGGTCGGAATGGCTGCTGGTGTTGATGCTGGTCAGGGGCT
ACGACCCTGCCGTCAGCGTGTTGACCGCCACCACCGGTAACAGCCTGGGAGCCTGTACCACCTGGCTGGTTGGACGTTAC
GGCGGCGACTGGCTGCTGGTCCGTCTGTTCAGGATCAGTGAGCAGCAACGGCAGCGGGCCGAGGCGTGGTATCAGCGCTA
CGGCATCCTGTCACTGTTGTTTTCCTGGCTGCCGGTGGCGGGCGATCCGCTCTGCCTGGTGGGGGGACTGCTGAAGATCC
GCTTTACCACCTTCCTGCTGCTGGTGGGGGTGGGCAAGCTGGTGCGGTATGCTGCAGTGGCCTGGTTGACGGTAAAAATG
GCAGCATAA

Upstream 100 bases:

>100_bases
GTTCGGCGACGTTAGATGTACACACAGTACATATGAGGAGCCGGAGACGCGCCAACAAAGACAGGGCCTTGAAATGGGAC
CGGCATAAAAGGTACGTGAT

Downstream 100 bases:

>100_bases
ATTCTGAAAAGGAGTAATGCCAATGAAGATCTTTATCGCCGGCGGCACCGGATTTGTGGGCGGGCACCTGACCGCAGAGC
TGCTGAAGCGTGGTCACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MDLFDNGFLTYLVPLLNWLQQPGYPALFALSFLASTLVPLGSEWLLVLMLVRGYDPAVSVLTATTGNSLGACTTWLVGRY
GGDWLLVRLFRISEQQRQRAEAWYQRYGILSLLFSWLPVAGDPLCLVGGLLKIRFTTFLLLVGVGKLVRYAAVAWLTVKM
AA

Sequences:

>Translated_162_residues
MDLFDNGFLTYLVPLLNWLQQPGYPALFALSFLASTLVPLGSEWLLVLMLVRGYDPAVSVLTATTGNSLGACTTWLVGRY
GGDWLLVRLFRISEQQRQRAEAWYQRYGILSLLFSWLPVAGDPLCLVGGLLKIRFTTFLLLVGVGKLVRYAAVAWLTVKM
AA
>Mature_162_residues
MDLFDNGFLTYLVPLLNWLQQPGYPALFALSFLASTLVPLGSEWLLVLMLVRGYDPAVSVLTATTGNSLGACTTWLVGRY
GGDWLLVRLFRISEQQRQRAEAWYQRYGILSLLFSWLPVAGDPLCLVGGLLKIRFTTFLLLVGVGKLVRYAAVAWLTVKM
AA

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=135, Percent_Identity=43.7037037037037, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 18018; Mature: 18018

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLFDNGFLTYLVPLLNWLQQPGYPALFALSFLASTLVPLGSEWLLVLMLVRGYDPAVSV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
LTATTGNSLGACTTWLVGRYGGDWLLVRLFRISEQQRQRAEAWYQRYGILSLLFSWLPVA
HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDPLCLVGGLLKIRFTTFLLLVGVGKLVRYAAVAWLTVKMAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLFDNGFLTYLVPLLNWLQQPGYPALFALSFLASTLVPLGSEWLLVLMLVRGYDPAVSV
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHH
LTATTGNSLGACTTWLVGRYGGDWLLVRLFRISEQQRQRAEAWYQRYGILSLLFSWLPVA
HHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDPLCLVGGLLKIRFTTFLLLVGVGKLVRYAAVAWLTVKMAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]