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The map label for this gene is ybjT [C]

Identifier: 189423451

GI number: 189423451

Start: 353768

End: 354652

Strand: Reverse

Name: ybjT [C]

Synonym: Glov_0380

Alternate gene names: 189423451

Gene position: 354652-353768 (Counterclockwise)

Preceding gene: 189423452

Following gene: 189423450

Centisome position: 9.05

GC content: 60.11

Gene sequence:

>885_bases
ATGAAGATCTTTATCGCCGGCGGCACCGGATTTGTGGGCGGGCACCTGACCGCAGAGCTGCTGAAGCGTGGTCACGAACT
GGTGCTTCTGAGCCATGCCCGTAGCGGTTCAACAGCGGCAGGAGTCACCTTTGTCAAAGGCGATGTCGTTGACCCGGCCG
TTTATGGTGCTGCCATGAAAGGCTGCGACGCGGCGATCAATCTGGTGGGGATCATTCGCGAATTTCCCGCCAAAGGGGTC
ACCTTTGAACGGCTGCATGTGGAGGCCACCGCCGGCATGGTTCAGGCGACACAACATGCGGGTGTGCTGCGCTACCTGCA
GATGTCCGCCCTTGGCACCAGGCTTGATGCGGTTTCCGGCTACCATCGCACCAAATGGCGGGGAGAGGAGATCGTACGGG
GCAGCGGGCTGGCCTGGACCATCTTCCGGCCTTCACTGATCTTTGGCCCCAGGGATGCCTTTGTCAACATGCTGGCAGAC
AACCTGCGGCTGGCACCGGTCATGCCCACCATGGGGGACGGCACGTACCGGCTGCAGCCGATCCACGGCAGCGATGTAGC
CCGCTGTTATGCCGACGCGTTGGAAAAGCCGGAGACCGCTGGCCAGACCTTTGAGCTGTGTGGCGAGGATCGCCTGACCT
ATCGTGAACTGCTGGATGCCATTGCCGAGGCGATGGGCAAGGGCCACCCCTGGAAACCGTCCCTGCCGTTATCGTTGATG
AAGCCGGTGATCAAGGCGCTGCAGGGGTTCAAGGCCTTTCCGATTACCATGGACCAGCTGCAGATGCTGCTTGAGGAAAA
TATCTGCGACGGCTGCTGGAGGAAAGCCTTTGAATTTGAACCGATCCGCTTTAGAGACGGTATCCGGGAGTACCTGCAAC
GATGA

Upstream 100 bases:

>100_bases
TTCCTGCTGCTGGTGGGGGTGGGCAAGCTGGTGCGGTATGCTGCAGTGGCCTGGTTGACGGTAAAAATGGCAGCATAAAT
TCTGAAAAGGAGTAATGCCA

Downstream 100 bases:

>100_bases
TTAAGCGCCTACTTATTCTGTCCCTGCTCATGCCCGGCGCTGTCCAGGCTGCTCACCCGATAGAACGTGATGATATGAGT
GATGCCCAGTTGCTGGAGGT

Product: NAD-dependent epimerase/dehydratase

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MKIFIAGGTGFVGGHLTAELLKRGHELVLLSHARSGSTAAGVTFVKGDVVDPAVYGAAMKGCDAAINLVGIIREFPAKGV
TFERLHVEATAGMVQATQHAGVLRYLQMSALGTRLDAVSGYHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFVNMLAD
NLRLAPVMPTMGDGTYRLQPIHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAMGKGHPWKPSLPLSLM
KPVIKALQGFKAFPITMDQLQMLLEENICDGCWRKAFEFEPIRFRDGIREYLQR

Sequences:

>Translated_294_residues
MKIFIAGGTGFVGGHLTAELLKRGHELVLLSHARSGSTAAGVTFVKGDVVDPAVYGAAMKGCDAAINLVGIIREFPAKGV
TFERLHVEATAGMVQATQHAGVLRYLQMSALGTRLDAVSGYHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFVNMLAD
NLRLAPVMPTMGDGTYRLQPIHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAMGKGHPWKPSLPLSLM
KPVIKALQGFKAFPITMDQLQMLLEENICDGCWRKAFEFEPIRFRDGIREYLQR
>Mature_294_residues
MKIFIAGGTGFVGGHLTAELLKRGHELVLLSHARSGSTAAGVTFVKGDVVDPAVYGAAMKGCDAAINLVGIIREFPAKGV
TFERLHVEATAGMVQATQHAGVLRYLQMSALGTRLDAVSGYHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFVNMLAD
NLRLAPVMPTMGDGTYRLQPIHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAMGKGHPWKPSLPLSLM
KPVIKALQGFKAFPITMDQLQMLLEENICDGCWRKAFEFEPIRFRDGIREYLQR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PEP-utilizing enzyme family [H]

Homologues:

Organism=Homo sapiens, GI6681764, Length=226, Percent_Identity=26.9911504424779, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17556106, Length=236, Percent_Identity=23.728813559322, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24667554, Length=240, Percent_Identity=29.1666666666667, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR008279 [H]

Pfam domain/function: PF01370 Epimerase; PF00391 PEP-utilizers [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 32323; Mature: 32323

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIAGGTGFVGGHLTAELLKRGHELVLLSHARSGSTAAGVTFVKGDVVDPAVYGAAMK
CEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
GCDAAINLVGIIREFPAKGVTFERLHVEATAGMVQATQHAGVLRYLQMSALGTRLDAVSG
HHHHHHHHHHHHHHCCCCCCEEHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFVNMLADNLRLAPVMPTMGDGTYRLQP
CHHCCCCCCHHHCCCCCEEEEECCCEEECCHHHHHHHHHHCCEEEECCCCCCCCCEEEEE
IHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAMGKGHPWKPSLPLSLM
CCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KPVIKALQGFKAFPITMDQLQMLLEENICDGCWRKAFEFEPIRFRDGIREYLQR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MKIFIAGGTGFVGGHLTAELLKRGHELVLLSHARSGSTAAGVTFVKGDVVDPAVYGAAMK
CEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH
GCDAAINLVGIIREFPAKGVTFERLHVEATAGMVQATQHAGVLRYLQMSALGTRLDAVSG
HHHHHHHHHHHHHHCCCCCCEEHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
YHRTKWRGEEIVRGSGLAWTIFRPSLIFGPRDAFVNMLADNLRLAPVMPTMGDGTYRLQP
CHHCCCCCCHHHCCCCCEEEEECCCEEECCHHHHHHHHHHCCEEEECCCCCCCCCEEEEE
IHGSDVARCYADALEKPETAGQTFELCGEDRLTYRELLDAIAEAMGKGHPWKPSLPLSLM
CCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
KPVIKALQGFKAFPITMDQLQMLLEENICDGCWRKAFEFEPIRFRDGIREYLQR
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]