Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is yeeZ [C]

Identifier: 189423449

GI number: 189423449

Start: 352432

End: 353295

Strand: Reverse

Name: yeeZ [C]

Synonym: Glov_0378

Alternate gene names: 189423449

Gene position: 353295-352432 (Counterclockwise)

Preceding gene: 189423450

Following gene: 189423448

Centisome position: 9.02

GC content: 61.34

Gene sequence:

>864_bases
ATGCAGCAACTGTTTATAGCCGGCTGCGGCTACACCGGCAGTCTGGTGGCCAATCTGGCTCTTGCGCAGGGCTGGTCCGT
GGCGGTTCACCTGAGGGATCAGGAAAAGGCTGCAGCCTTGACCAGGGCCGGTGCAGAGGTCTGTCTCTGCAGCATGGATG
AACGTGATGACATCCCTCGGCTGCCGCTGGACGGACGGATGCTGCTGTACAGTGTCCCTCCTCAGGGAGGCGGCAGCATT
GATCTGCGTGCCCGCAATTTCTGCGCCGCCCTGGAGCGGGATCAGACCTTCCCATCCAAAATCGTGTACCTCAGCGCCAC
CAGCGTTTACGGTGACACCGGCGGCGCCGTGGTAACCGAACAGAGTCCCACAGAGCCGGCCTCAGCCATGGGCAAACGAC
GGCTGGATGCCGAACAACTGTTTCAGGACTTTTGCCTGAAGCACGGTATTCCGGTGGTAATCCTGAGGGTCTCCGCCATC
TACGGCAAGGGGCGCCTGCCGTTGATGCAGATCAACCAGGGCCAGCCGCTGCTGCGGGAGGAGCTGGCCAGGCCGTCCAA
CCGGATTCACATTGATGATCTGGCCCGGGTCTGCCTGTCTGCCCTGCTCAAAGGGACCGGCATCTACAACGTCAGTGACG
GTCATCCGGCCAGCATGACAGCCTACTTCAACGCCTGTGCCGATGCCCTGCAGAAACCCCGTCAGCCCCAGATCGACCTT
GAGGAGGCCCGCCGGGTGATGCCGCCGCTCTTGTTCAACTATTTCATGGAATCACGGGTGGTTGACAACCGGCGGATGCT
GGAGGATCTGGACATTTCCCTGCGCTATCCCGATCTGCAGCAGGGGATTGCCGCCTCACTCTGA

Upstream 100 bases:

>100_bases
TCGGCCTGTGGGGCAAGGGTGCGATCAAGGTCAGGATTGTTGCAATCGAGAAAAAACATCCGCTGGACGAACTGCTTGAT
GAAGGAAAGGGATAACAATT

Downstream 100 bases:

>100_bases
GCCTTTACAGATCGCAAATCTCTGGTATAGGAGCAGAGTATTGCTCCTTTGGAGAGATGAAACTGATAAAATGAATGGAG
GTGTGCCATGAAGAAACTGT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family; Epimerase; Actc Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NADP Oxidoreductase Co; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Epimerase/Dehydratase Protein; NAD-Dependent Epimerase; NAD Dependent Epimerase/Dehydratase-Related Protein

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI
DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI
YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL
EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL

Sequences:

>Translated_287_residues
MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI
DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI
YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL
EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL
>Mature_287_residues
MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPRLPLDGRMLLYSVPPQGGGSI
DLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTEQSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAI
YGKGRLPLMQINQGQPLLREELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL
EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31550; Mature: 31550

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPR
CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCC
LPLDGRMLLYSVPPQGGGSIDLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTE
CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEC
QSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAIYGKGRLPLMQINQGQPLLRE
CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEEECCCCCHHHH
ELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL
HHCCCCCCEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCC
>Mature Secondary Structure
MQQLFIAGCGYTGSLVANLALAQGWSVAVHLRDQEKAAALTRAGAEVCLCSMDERDDIPR
CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCCC
LPLDGRMLLYSVPPQGGGSIDLRARNFCAALERDQTFPSKIVYLSATSVYGDTGGAVVTE
CCCCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCEEEEC
QSPTEPASAMGKRRLDAEQLFQDFCLKHGIPVVILRVSAIYGKGRLPLMQINQGQPLLRE
CCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCEEEECCCCCHHHH
ELARPSNRIHIDDLARVCLSALLKGTGIYNVSDGHPASMTAYFNACADALQKPRQPQIDL
HHCCCCCCEEHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCH
EEARRVMPPLLFNYFMESRVVDNRRMLEDLDISLRYPDLQQGIAASL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA