Click here to switch to the map view.

The map label for this gene is dapA [H]

Identifier: 189354068

GI number: 189354068

Start: 2401096

End: 2402025

Strand: Reverse

Name: dapA [H]

Synonym: BMULJ_05321

Alternate gene names: 189354068

Gene position: 2402025-2401096 (Counterclockwise)

Preceding gene: 189354069

Following gene: 189354067

Centisome position: 97.12

GC content: 69.03

Gene sequence:

>930_bases
ATGACATCGAGCCGTACGCCGCGTTACCGCGGCATTTTCCCGGTCGTTCCGACGACCTTCACCGAGACCGGCGAGCTCGA
CCTCGCGAGCCAGAAGCGCGCGGTCGACTTCATGATCGACGCGGGCTCGGACGGGCTCTGCATTCTCGCGAACTTCTCCG
AGCAATTCGCGCTCGCCGACGACGAACGCGACGTGCTGACGCGCACGATCCTCGAGCACGTCGCCGGCCGCGTGCCGGTG
ATCGTCACGACGTCGCACTACAGCACGCAGACCTGCATCGCGCGCAGCGTACGCGCCCAGCAGCTCGGCGCGGCGATGGT
GATGGTGATGCCGCCGTATCACGGCGCGACGTTCCGCGTGCCGGAAGCGCAGATCCACGCGTTCTACGCACGCCTGTCGG
ACGCCTTGTCGATTCCGATCATGATCCAGGACGCGCCCGCGAGCGGCACGGTGCTGTCCGCGCCGTTTCTCGCGCAGCTC
GCGCGCGAGATCGAGCACGTCGCGTACTTCAAGATCGAGACGCCTGGCGCCGCGACCAAGCTGCGCGAGCTGATCCGGCT
CGGCGGCGACGCGATCGAAGGGCCGTGGGACGGCGAGGAAGCGATCACGCTGCTCGCCGACCTGCACGCCGGCGCGACCG
GTGCGATGACGGGCGGTGCGTATCCGGACGGCATTCGGCCGATCCTCGAAGCGCATCGCGAAGGGCGCCACGACGACGCG
TTCGCGCGCTATCAGACGTGGCTGCCGCTGATCAACCACGAGAACCGGCAGTCCGGGATCCTGACCGCGAAGGCGCTGAT
GCGCGAAGGCGGCGTGATCGCGTGCGAGGCGCCGCGGCATCCGATGCCGACGCTGCATCCGGACACGCGCGCGGAGCTGA
TCGCGATCGCGCGCCGTCTCGATCCGCTCGTGCTGCGCTGGGCACGCTGA

Upstream 100 bases:

>100_bases
CGCGGCGCTGCGTGCGCCGCAGCGCGCGGGCGACGCGCTCGCGCGCGAATCGCGGCCGCTTTCCGGCTGACCGCCGTTTG
ACTGACGCAGGATCCGAACC

Downstream 100 bases:

>100_bases
GCAACGAACCAAGGAGCGCACGATGAGCCAAGTCGTTTCGCTGGGTGTCGTCGGGATCGGCAAGATCGCCCGCGACCAGC
ATTTGCCGGCGATTGCCGCC

Product: dihydrodipicolinate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MTSSRTPRYRGIFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFALADDERDVLTRTILEHVAGRVPV
IVTTSHYSTQTCIARSVRAQQLGAAMVMVMPPYHGATFRVPEAQIHAFYARLSDALSIPIMIQDAPASGTVLSAPFLAQL
AREIEHVAYFKIETPGAATKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGAYPDGIRPILEAHREGRHDDA
FARYQTWLPLINHENRQSGILTAKALMREGGVIACEAPRHPMPTLHPDTRAELIAIARRLDPLVLRWAR

Sequences:

>Translated_309_residues
MTSSRTPRYRGIFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFALADDERDVLTRTILEHVAGRVPV
IVTTSHYSTQTCIARSVRAQQLGAAMVMVMPPYHGATFRVPEAQIHAFYARLSDALSIPIMIQDAPASGTVLSAPFLAQL
AREIEHVAYFKIETPGAATKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGAYPDGIRPILEAHREGRHDDA
FARYQTWLPLINHENRQSGILTAKALMREGGVIACEAPRHPMPTLHPDTRAELIAIARRLDPLVLRWAR
>Mature_308_residues
TSSRTPRYRGIFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFALADDERDVLTRTILEHVAGRVPVI
VTTSHYSTQTCIARSVRAQQLGAAMVMVMPPYHGATFRVPEAQIHAFYARLSDALSIPIMIQDAPASGTVLSAPFLAQLA
REIEHVAYFKIETPGAATKLRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGAYPDGIRPILEAHREGRHDDAF
ARYQTWLPLINHENRQSGILTAKALMREGGVIACEAPRHPMPTLHPDTRAELIAIARRLDPLVLRWAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=248, Percent_Identity=30.241935483871, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI87082415, Length=180, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: NA

Molecular weight: Translated: 33794; Mature: 33663

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSRTPRYRGIFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFALAD
CCCCCCCCCCCEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCEECCC
DERDVLTRTILEHVAGRVPVIVTTSHYSTQTCIARSVRAQQLGAAMVMVMPPYHGATFRV
CHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEC
PEAQIHAFYARLSDALSIPIMIQDAPASGTVLSAPFLAQLAREIEHVAYFKIETPGAATK
CHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHHHHHHHHHHHHEEEEEEECCCHHHH
LRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGAYPDGIRPILEAHREGRHDDA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH
FARYQTWLPLINHENRQSGILTAKALMREGGVIACEAPRHPMPTLHPDTRAELIAIARRL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHC
DPLVLRWAR
CHHHEEECC
>Mature Secondary Structure 
TSSRTPRYRGIFPVVPTTFTETGELDLASQKRAVDFMIDAGSDGLCILANFSEQFALAD
CCCCCCCCCCEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEEEECCCCCEECCC
DERDVLTRTILEHVAGRVPVIVTTSHYSTQTCIARSVRAQQLGAAMVMVMPPYHGATFRV
CHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEC
PEAQIHAFYARLSDALSIPIMIQDAPASGTVLSAPFLAQLAREIEHVAYFKIETPGAATK
CHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCHHHHHHHHHHHHEEEEEEECCCHHHH
LRELIRLGGDAIEGPWDGEEAITLLADLHAGATGAMTGGAYPDGIRPILEAHREGRHDDA
HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHH
FARYQTWLPLINHENRQSGILTAKALMREGGVIACEAPRHPMPTLHPDTRAELIAIARRL
HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHC
DPLVLRWAR
CHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]