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The map label for this gene is puuR [H]

Identifier: 189354010

GI number: 189354010

Start: 2338684

End: 2339196

Strand: Reverse

Name: puuR [H]

Synonym: BMULJ_05263

Alternate gene names: 189354010

Gene position: 2339196-2338684 (Counterclockwise)

Preceding gene: 189354013

Following gene: 189354009

Centisome position: 94.58

GC content: 63.94

Gene sequence:

>513_bases
TTGCGCCAACGATTGAAGCGCACGCTCGACGAAACGGCGACAGCCGCGGGCATTTCGAAGCCGTTTCTGTCGCAAGTCGA
GCGCGGGCTCGCGTCGCCGTCGCTGACGTCGTTGGCCGGCATCGCGCAGGCGCTCGGCGTGACCGTGCAGTATTTCGTCG
ATACGCCGAGCGAGGAGCGTTCGGTGTGTCGAGGCGAGCAGCTGCGCTTTTTCGGGTTCGCCGATTCGGCCAACCTGTTC
GCGAGGCTGACGAACCTCTCGGAAGGCCGCCAGCTCGAGGCGATCCTCGTGCGGATGCCGCCGGGGCAGAAGCGGTCCGA
GGTGACGACACATGCAGGAGAGGAGTTCCTGTATGTGGTGGAAGGAGAAGTGTCGCTGACGCTGGAAGGCAAGACGTTCG
TCCTGCAGGCCGGCGATAGTTCGCACTACCAGTCGACGGTTCCGCACAGCTGGGCCAACACCGCGAAGATCGAATCGGTG
GTGGTCTGGGTCGGTACGCCGAGGCTGTTCTAA

Upstream 100 bases:

>100_bases
ACATTTTTTGACGACCACTTTTCGGCCTGCTATGGTTCCCCCCACTGAAAACTCGCGGTCTGCCGTCGCTGCCGCCGCAC
TGGGCAGCAAGATTCGCGCG

Downstream 100 bases:

>100_bases
CGCACAGGTATTCCTTCGTTTCTCGGACGGGATGCCTGTCGAAAGAAACGTAAGGGATACTAACATGCAATACGAGAACC
ACGGGCCTCCTCAATCGCTG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFVDTPSEERSVCRGEQLRFFGFADSANLF
ARLTNLSEGRQLEAILVRMPPGQKRSEVTTHAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESV
VVWVGTPRLF

Sequences:

>Translated_170_residues
MRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFVDTPSEERSVCRGEQLRFFGFADSANLF
ARLTNLSEGRQLEAILVRMPPGQKRSEVTTHAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESV
VVWVGTPRLF
>Mature_170_residues
MRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFVDTPSEERSVCRGEQLRFFGFADSANLF
ARLTNLSEGRQLEAILVRMPPGQKRSEVTTHAGEEFLYVVEGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESV
VVWVGTPRLF

Specific function: Represses puuD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787557, Length=174, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 18632; Mature: 18632

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFVDTPSEER
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHH
SVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVTTHAGEEFLYVV
HHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHCCCCEEEEEE
EGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRLF
ECEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MRQRLKRTLDETATAAGISKPFLSQVERGLASPSLTSLAGIAQALGVTVQYFVDTPSEER
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHH
SVCRGEQLRFFGFADSANLFARLTNLSEGRQLEAILVRMPPGQKRSEVTTHAGEEFLYVV
HHHCCCCEEEEEECCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHCCCCEEEEEE
EGEVSLTLEGKTFVLQAGDSSHYQSTVPHSWANTAKIESVVVWVGTPRLF
ECEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1840553 [H]