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The map label for this gene is oppC [H]

Identifier: 189354007

GI number: 189354007

Start: 2335026

End: 2335928

Strand: Reverse

Name: oppC [H]

Synonym: BMULJ_05260

Alternate gene names: 189354007

Gene position: 2335928-2335026 (Counterclockwise)

Preceding gene: 189354008

Following gene: 189354006

Centisome position: 94.45

GC content: 68.44

Gene sequence:

>903_bases
ATGACTCCCACTACGCCAGCCGTCGGTCTGCCCGCGCAGACCGATACGCCGCCGCGTTCGCGCTCGCCGCTGGCGCTCGC
GTTCGCGCGCTTCCTGCACAACCGTGCGGCCGTGTTCAGCCTCGTGCTGCTCGCGCTGATCGTGATCGCCTGCTTCGTCG
GTCCGTGGCTGCTCGCGGCCGATCCGGCCGCAAGCGACTGGGGCGCAATCAGCCTGCCGCCGACGCTCGCGAACCAGCAC
TGGTTCGGCACCGACGAGCTCGGCCGCGACTTGCTCGTGCGCACGCTGATCGGCGGGCGCGTGTCGATCGAGGTCGGGCT
GCTCGGCACGCTCGTGTCGGGCCTGTTCGGCGTCGCGTGGGGCGCGACCGCGGGCTTCGCGGGCGGCCGCGTCGACGCGG
TGATGATGCGCATCGTCGACATGATGTACGCGATCCCGTACTTGCTGATCGCGATCCTGATGATGACGCTGTTCGGCCGT
TCGTTCCTGCTCGTCGTGCTGACGATCAGCGCGTTCTCGTGGATCGACATGGCGCGCGTCGTGCGCGGCCAGACGCTGTC
GCTGCGCAACCGCGAGTTCGTCGATGCGGCGCGCGCGATCGGCGTGTCGCCGGTGTCGATCGTGCGCCGCCATATCGTGC
CGAACCTGCTCGGCGTCGTCGTCGTGTATGCGACCGTCTCGGTGCCGAACATCGTGCTGACCGAATCGGTGCTGTCGTTT
CTCGGGCTCGGCGTGCAGGAGCCGATGACGAGCTGGGGCGTGCTGATCCAGGACGGCGCGCAGAAACTCGAATCGATGCC
GTGGCTGCTGCTGTGCCCGGCCGTCATGCTCTGCGTGACGCTCTATTGCGTGAATTTCGCCGGCGACGGCCTGCGGGATG
CGCTCGACCCGAAGGATCGCTGA

Upstream 100 bases:

>100_bases
GTCGTGCTGACGACCGTCTGCGCGGTGCTGTTCAACCTGCTGATCGACCTCGCCTACGCATGGCTCGATCCGCGCATCCG
TTACTGAGCGAGGCCCTGCG

Downstream 100 bases:

>100_bases
AGATGGCCGCACTACTTGAAGTCGACAACCTCGGCGTGCGCTTCACGCGCAAGGATGCGCCGCCGATCGACGCCGTCAGC
GGCGTGTCGTTCTCGCTCGA

Product: peptide/nickel transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTPTTPAVGLPAQTDTPPRSRSPLALAFARFLHNRAAVFSLVLLALIVIACFVGPWLLAADPAASDWGAISLPPTLANQH
WFGTDELGRDLLVRTLIGGRVSIEVGLLGTLVSGLFGVAWGATAGFAGGRVDAVMMRIVDMMYAIPYLLIAILMMTLFGR
SFLLVVLTISAFSWIDMARVVRGQTLSLRNREFVDAARAIGVSPVSIVRRHIVPNLLGVVVVYATVSVPNIVLTESVLSF
LGLGVQEPMTSWGVLIQDGAQKLESMPWLLLCPAVMLCVTLYCVNFAGDGLRDALDPKDR

Sequences:

>Translated_300_residues
MTPTTPAVGLPAQTDTPPRSRSPLALAFARFLHNRAAVFSLVLLALIVIACFVGPWLLAADPAASDWGAISLPPTLANQH
WFGTDELGRDLLVRTLIGGRVSIEVGLLGTLVSGLFGVAWGATAGFAGGRVDAVMMRIVDMMYAIPYLLIAILMMTLFGR
SFLLVVLTISAFSWIDMARVVRGQTLSLRNREFVDAARAIGVSPVSIVRRHIVPNLLGVVVVYATVSVPNIVLTESVLSF
LGLGVQEPMTSWGVLIQDGAQKLESMPWLLLCPAVMLCVTLYCVNFAGDGLRDALDPKDR
>Mature_299_residues
TPTTPAVGLPAQTDTPPRSRSPLALAFARFLHNRAAVFSLVLLALIVIACFVGPWLLAADPAASDWGAISLPPTLANQHW
FGTDELGRDLLVRTLIGGRVSIEVGLLGTLVSGLFGVAWGATAGFAGGRVDAVMMRIVDMMYAIPYLLIAILMMTLFGRS
FLLVVLTISAFSWIDMARVVRGQTLSLRNREFVDAARAIGVSPVSIVRRHIVPNLLGVVVVYATVSVPNIVLTESVLSFL
GLGVQEPMTSWGVLIQDGAQKLESMPWLLLCPAVMLCVTLYCVNFAGDGLRDALDPKDR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787498, Length=271, Percent_Identity=54.2435424354244, Blast_Score=273, Evalue=7e-75,
Organism=Escherichia coli, GI1787054, Length=284, Percent_Identity=33.0985915492958, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1787760, Length=261, Percent_Identity=36.7816091954023, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789889, Length=243, Percent_Identity=36.2139917695473, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI1789964, Length=287, Percent_Identity=34.1463414634146, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788505, Length=227, Percent_Identity=33.920704845815, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787549, Length=284, Percent_Identity=28.169014084507, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32213; Mature: 32081

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTTPAVGLPAQTDTPPRSRSPLALAFARFLHNRAAVFSLVLLALIVIACFVGPWLLAA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DPAASDWGAISLPPTLANQHWFGTDELGRDLLVRTLIGGRVSIEVGLLGTLVSGLFGVAW
CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
GATAGFAGGRVDAVMMRIVDMMYAIPYLLIAILMMTLFGRSFLLVVLTISAFSWIDMARV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRGQTLSLRNREFVDAARAIGVSPVSIVRRHIVPNLLGVVVVYATVSVPNIVLTESVLSF
HCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LGLGVQEPMTSWGVLIQDGAQKLESMPWLLLCPAVMLCVTLYCVNFAGDGLRDALDPKDR
HCCCHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCC
>Mature Secondary Structure 
TPTTPAVGLPAQTDTPPRSRSPLALAFARFLHNRAAVFSLVLLALIVIACFVGPWLLAA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]