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The map label for this gene is coeR [H]

Identifier: 189353903

GI number: 189353903

Start: 2213941

End: 2214945

Strand: Direct

Name: coeR [H]

Synonym: BMULJ_05155

Alternate gene names: 189353903

Gene position: 2213941-2214945 (Clockwise)

Preceding gene: 189353898

Following gene: 189353904

Centisome position: 89.52

GC content: 65.07

Gene sequence:

>1005_bases
ATGGACCGGCTTCAGGCCATGCAGGTGTTTACTCGCGTCGTCGACACGAGCAGCTTCACGAAGGCAGCGGAGACGCTCGG
CCTGCCGCGCGCGTCCGTCACGACGATCATCCAGAATCTCGAAGCGTTCCTCGGCGTGCGGCTGATGCACCGGACCACGC
GCCGGCTGTCGCTGACGCCCGACGGCGCCGCCTACTATGAACGCTGCGTGCGCATCCTCGCGGACGTCGAGGAAACCGAG
GCGAGCTTCCAGAACAACAACCGGAAGCCGCACGGAAAGTTGCGTGTCGACATGCCGGGCTCGATCGGGCGGCTACTCGT
GATTCCTTCGCTCTGCGAATTCCATACGCGCTATCCGGACATCGATCTGCAGCTCGGCTTGTCCGATCGTCCGGTCGATC
TGCTGCAGGAAGGCGTCGACTGCGTGATCCGCGTCGGCGCGCTGCAGGATTCGTCGCTCGTCGCGCGCCGCGTCGGGCTG
TTCGAGGGCGTGTCGGTCGCCGCGCCGGCCTATCTCGAGAAGTACGGCGAGCCGCAGACGATCGAAGACCTGAGCCAGCA
CAAGGCCGTCAATTATTTTTCGAGCCGCACGGGCCGCACGATCGACTGGTCGTTCCTGATCGACGGCAAGGAAGTCGAGG
TCAAGATGAACGGCATCGTGTCGGTGAACGACGCCGACGCGTATGTGACCTGCGGGCTCGAAGGCTTCGGGCTGATCCAG
CCGCCGCTCTTCATGGTGCTGCCGCATCTGCGCGAAGGCCGCCTGAAGGAAGTGCTGCCGGGCTTCAAGCCGCTGCCGAT
GCCGATCTCGGTCGTGTATCCGCACAGCCGCCATCTTTCGCCGAAGGTGCGCGTGTTCGTCGACTGGGTCGCCGAGGTGT
TCGACCGCTGCCCGCTGCTGAGCGGCAAGGGCAGCCTCGACGCGACGTGCAGCAAGCGCACGTTCGAGGAAGCCGAGCGC
GCACCGGTGCTCGACACGCCCGTCATCAACGAATGGGTCGCATGA

Upstream 100 bases:

>100_bases
GGCAACACAATTCAACGCCCCCGAACAATCCAGGCTGCGTCTGCCCACGAGGCAGCGCAGCCTCGTTCGTTCCGGGGCTC
ATTAGATTGCGGAGGTAGTG

Downstream 100 bases:

>100_bases
TCGTCTGACGCGCGCGCGCGTATCGCGGTGCACGGGCGGACGGCCCGTGCGCCGTCCCGCCTTTCTCTCTCCCCCTGCAT
TTCCTTCTGCGTGCCGCGAT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MDRLQAMQVFTRVVDTSSFTKAAETLGLPRASVTTIIQNLEAFLGVRLMHRTTRRLSLTPDGAAYYERCVRILADVEETE
ASFQNNNRKPHGKLRVDMPGSIGRLLVIPSLCEFHTRYPDIDLQLGLSDRPVDLLQEGVDCVIRVGALQDSSLVARRVGL
FEGVSVAAPAYLEKYGEPQTIEDLSQHKAVNYFSSRTGRTIDWSFLIDGKEVEVKMNGIVSVNDADAYVTCGLEGFGLIQ
PPLFMVLPHLREGRLKEVLPGFKPLPMPISVVYPHSRHLSPKVRVFVDWVAEVFDRCPLLSGKGSLDATCSKRTFEEAER
APVLDTPVINEWVA

Sequences:

>Translated_334_residues
MDRLQAMQVFTRVVDTSSFTKAAETLGLPRASVTTIIQNLEAFLGVRLMHRTTRRLSLTPDGAAYYERCVRILADVEETE
ASFQNNNRKPHGKLRVDMPGSIGRLLVIPSLCEFHTRYPDIDLQLGLSDRPVDLLQEGVDCVIRVGALQDSSLVARRVGL
FEGVSVAAPAYLEKYGEPQTIEDLSQHKAVNYFSSRTGRTIDWSFLIDGKEVEVKMNGIVSVNDADAYVTCGLEGFGLIQ
PPLFMVLPHLREGRLKEVLPGFKPLPMPISVVYPHSRHLSPKVRVFVDWVAEVFDRCPLLSGKGSLDATCSKRTFEEAER
APVLDTPVINEWVA
>Mature_334_residues
MDRLQAMQVFTRVVDTSSFTKAAETLGLPRASVTTIIQNLEAFLGVRLMHRTTRRLSLTPDGAAYYERCVRILADVEETE
ASFQNNNRKPHGKLRVDMPGSIGRLLVIPSLCEFHTRYPDIDLQLGLSDRPVDLLQEGVDCVIRVGALQDSSLVARRVGL
FEGVSVAAPAYLEKYGEPQTIEDLSQHKAVNYFSSRTGRTIDWSFLIDGKEVEVKMNGIVSVNDADAYVTCGLEGFGLIQ
PPLFMVLPHLREGRLKEVLPGFKPLPMPISVVYPHSRHLSPKVRVFVDWVAEVFDRCPLLSGKGSLDATCSKRTFEEAER
APVLDTPVINEWVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI145693193, Length=294, Percent_Identity=41.4965986394558, Blast_Score=244, Evalue=5e-66,
Organism=Escherichia coli, GI1786401, Length=298, Percent_Identity=33.5570469798658, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1789639, Length=296, Percent_Identity=32.7702702702703, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1787589, Length=283, Percent_Identity=27.9151943462898, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1789440, Length=285, Percent_Identity=30.8771929824561, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1787128, Length=282, Percent_Identity=29.4326241134752, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI87081978, Length=291, Percent_Identity=30.9278350515464, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1789173, Length=197, Percent_Identity=31.9796954314721, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788481, Length=291, Percent_Identity=23.7113402061856, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788748, Length=136, Percent_Identity=34.5588235294118, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788706, Length=296, Percent_Identity=22.972972972973, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1786448, Length=295, Percent_Identity=21.0169491525424, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 37210; Mature: 37210

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLQAMQVFTRVVDTSSFTKAAETLGLPRASVTTIIQNLEAFLGVRLMHRTTRRLSLTP
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DGAAYYERCVRILADVEETEASFQNNNRKPHGKLRVDMPGSIGRLLVIPSLCEFHTRYPD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHEEHHHHHHHHCCCCC
IDLQLGLSDRPVDLLQEGVDCVIRVGALQDSSLVARRVGLFEGVSVAAPAYLEKYGEPQT
CEEEECCCCCCHHHHHCCHHEEEEECCCCCHHHHHHHHHHHCCCHHCCCHHHHHCCCCCH
IEDLSQHKAVNYFSSRTGRTIDWSFLIDGKEVEVKMNGIVSVNDADAYVTCGLEGFGLIQ
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCEEEECCCCEEEEECCCCCCCCC
PPLFMVLPHLREGRLKEVLPGFKPLPMPISVVYPHSRHLSPKVRVFVDWVAEVFDRCPLL
CHHHHHCCHHCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SGKGSLDATCSKRTFEEAERAPVLDTPVINEWVA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure
MDRLQAMQVFTRVVDTSSFTKAAETLGLPRASVTTIIQNLEAFLGVRLMHRTTRRLSLTP
CCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
DGAAYYERCVRILADVEETEASFQNNNRKPHGKLRVDMPGSIGRLLVIPSLCEFHTRYPD
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHEEHHHHHHHHCCCCC
IDLQLGLSDRPVDLLQEGVDCVIRVGALQDSSLVARRVGLFEGVSVAAPAYLEKYGEPQT
CEEEECCCCCCHHHHHCCHHEEEEECCCCCHHHHHHHHHHHCCCHHCCCHHHHHCCCCCH
IEDLSQHKAVNYFSSRTGRTIDWSFLIDGKEVEVKMNGIVSVNDADAYVTCGLEGFGLIQ
HHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCEEEECCCCEEEEECCCCCCCCC
PPLFMVLPHLREGRLKEVLPGFKPLPMPISVVYPHSRHLSPKVRVFVDWVAEVFDRCPLL
CHHHHHCCHHCCCCHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SGKGSLDATCSKRTFEEAERAPVLDTPVINEWVA
CCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]