| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
Click here to switch to the map view.
The map label for this gene is ydjE [H]
Identifier: 189353816
GI number: 189353816
Start: 2112752
End: 2114170
Strand: Reverse
Name: ydjE [H]
Synonym: BMULJ_05063
Alternate gene names: 189353816
Gene position: 2114170-2112752 (Counterclockwise)
Preceding gene: 189353818
Following gene: 189353815
Centisome position: 85.48
GC content: 67.44
Gene sequence:
>1419_bases ATGGCTTCAACGGACAGCATCCCGCAGGCGCCGGCCCGATCCCCGCTGATCGACGCCGGCACGATTTCGGCCCGCCTCGA CCGGCTGCCGCCGACGCGCAGCGTGTGGAAGCTCGTCGTGCTGCTGAGCCTCGGCTTCTTCTTCGAACTCTACGATCTGC TGTACAGCGGCTACGTCGCGCCCGGTCTCGTGAAAAGCGGGATCCTCAGCGCGACGACGCACGGGCTGTTCGGCACGACG GGCGTCGCGAGCTTCATCGCCGCGCTGTTTTCGGGGCTGTTCGTCGGCACGATCGCCTGCGGCTTTCTCGCCGACCGCTT CGGCCGCCGCGCGATCTTCACGTGGTCGCTGCTGTGGTACACGGCCGCGAACGTCGTGATGGCGTTCCAGGACACCGCGA CGGGCCTGAATTTCTGGCGCTTCGTCGTCGGTCTCGGCCTCGGCGTCGAGATGGTGACGATCGGCACGTACATCTCCGAG CTCGTGCCGAAGCAGATTCGCGGCCGCGCGTTCGCGTGCGAGCAGGCGGTCGGTTTCGTCGCGGTGCCGGTGGTCGCGTT CCTCGCGTATCTGCTCGTGCCGCGTGCGCCGTTCGGCCTCGACGGCTGGCGCTGGGTCGTGCTGATCGGCGCGCACGGCG CGATCTTCGTCTGGTGGATTCGCCGCGAACTGCCGGAAAGCCCGCGCTGGCTCGCGCAGCAGGGCCGGCTCGACGAAGCC GATCGCGTGATGCGTGCGCTCGAAGCGAAGGTCGAGGCCGAATACGGGCGGCCGCTGCCGGCGCCCGCCCCGGCGGAGCC GGTTGCCGAACGCGGCAGCTTCCGCGACATGTGGGTGCCGCCGTATCGTAGCCGCACGATCATGATGACGATCTTCAACG TGTTCCAGACGGTCGGCTTCTACGGGTTCGCGAACTGGGTGCCGACGCTGCTGATCAAGCAGGGGATCACGATCACCTCG AGCCTGATGTATTCGAGCGTGATCGCGCTCGCCGCACCGGTCGGCCCGCTGATCGGGCTCGTGATCGCGGACCGCTTCGA GCGCAAGTCGGTGATCGTCGCGATGGCGGCGACGGTGCTCGTCTGCGGGCTGCTGTTCAGCCAGACGACGATCGGCGCGC TGCTGATCGTGCTCGGCATCGGCCTGACGCTCGCGAGCAACATCATGTCGTACAGCTTCCATGCGTATCAGGCCGAGCTG TTCCCGACGTCGATCCGTGCGCGCGCGGTCGGCTTCGTCTACTCGTGGAGCCGCTTCTCGGCGATTTTCTCGTCGTTCGT GATTGCCGCGGTGCTCAAGGGCTTCGGCACGGTCGGCGTGTTCGCGTTCATTGCGGGCGCGATGGCGATCGTGATGGCCG CGATCGGCATCATGGGGCCGCGCACGAGGGGCATCGCGCTCGAAGCGATCTCGCGATGA
Upstream 100 bases:
>100_bases CAAGGCACGTAAGCGCGACACGTGCCGGTACAATGCAGCGATTCGCGCGGCGCCGGACGGCCGCGACAACAACAGACGAC ACGACAGGAGACGCATCACG
Downstream 100 bases:
>100_bases GACGGTGCGCGCGGCACGGTCACGCGTTGAAACAACGGTAACGAAACGCAAATTCGCGGCGAAACGGGCGCCGCGTCGCT GCCGATTTCGCCATGCACGC
Product: putative metabolite:H+ symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTT GVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISE LVPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITS SLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAEL FPTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR
Sequences:
>Translated_472_residues MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTT GVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISE LVPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITS SLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAEL FPTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR >Mature_471_residues ASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVAPGLVKSGILSATTHGLFGTTG VASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWYTAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISEL VPKQIRGRAFACEQAVGFVAVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEAD RVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGFYGFANWVPTLLIKQGITITSS LMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVLVCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELF PTSIRARAVGFVYSWSRFSAIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI166064021, Length=389, Percent_Identity=25.9640102827763, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI4506999, Length=398, Percent_Identity=24.8743718592965, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI302148518, Length=359, Percent_Identity=26.7409470752089, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI24308167, Length=501, Percent_Identity=21.9560878243513, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI203098995, Length=309, Percent_Identity=26.2135922330097, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI166197673, Length=358, Percent_Identity=28.7709497206704, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI4507005, Length=408, Percent_Identity=25.4901960784314, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI23510410, Length=334, Percent_Identity=26.0479041916168, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI24497490, Length=414, Percent_Identity=25.1207729468599, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI216548223, Length=337, Percent_Identity=23.7388724035608, Blast_Score=66, Evalue=8e-11, Organism=Homo sapiens, GI213021148, Length=423, Percent_Identity=23.8770685579196, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1788068, Length=465, Percent_Identity=28.6021505376344, Blast_Score=172, Evalue=6e-44, Organism=Escherichia coli, GI1788074, Length=463, Percent_Identity=29.1576673866091, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI87082159, Length=423, Percent_Identity=27.4231678486998, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786229, Length=441, Percent_Identity=24.4897959183673, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI87082404, Length=430, Percent_Identity=23.953488372093, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789207, Length=411, Percent_Identity=24.0875912408759, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87082231, Length=206, Percent_Identity=29.6116504854369, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789312, Length=325, Percent_Identity=24.3076923076923, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790463, Length=436, Percent_Identity=21.7889908256881, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25145172, Length=406, Percent_Identity=25.615763546798, Blast_Score=75, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319718, Length=324, Percent_Identity=25.3086419753086, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323653, Length=481, Percent_Identity=22.4532224532225, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320705, Length=469, Percent_Identity=22.1748400852878, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI19922616, Length=396, Percent_Identity=24.7474747474747, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24640198, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640196, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24640200, Length=417, Percent_Identity=23.021582733813, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI21355657, Length=361, Percent_Identity=24.9307479224377, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24652793, Length=435, Percent_Identity=21.8390804597701, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24652795, Length=394, Percent_Identity=21.8274111675127, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51130; Mature: 50999
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVA CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGLVKSGILSATTHGLFGTTGVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWY CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISELVPKQIRGRAFACEQAVGFV HHHHHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCHHHHHCCCCCHH DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGF HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YGFANWVPTLLIKQGITITSSLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELFPTSIRARAVGFVYSWSRFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC >Mature Secondary Structure ASTDSIPQAPARSPLIDAGTISARLDRLPPTRSVWKLVVLLSLGFFFELYDLLYSGYVA CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PGLVKSGILSATTHGLFGTTGVASFIAALFSGLFVGTIACGFLADRFGRRAIFTWSLLWY CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH TAANVVMAFQDTATGLNFWRFVVGLGLGVEMVTIGTYISELVPKQIRGRAFACEQAVGFV HHHHHHEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVPVVAFLAYLLVPRAPFGLDGWRWVVLIGAHGAIFVWWIRRELPESPRWLAQQGRLDEA HHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEHHHHHHCCCCCHHHHHCCCCCHH DRVMRALEAKVEAEYGRPLPAPAPAEPVAERGSFRDMWVPPYRSRTIMMTIFNVFQTVGF HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YGFANWVPTLLIKQGITITSSLMYSSVIALAAPVGPLIGLVIADRFERKSVIVAMAATVL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VCGLLFSQTTIGALLIVLGIGLTLASNIMSYSFHAYQAELFPTSIRARAVGFVYSWSRFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH AIFSSFVIAAVLKGFGTVGVFAFIAGAMAIVMAAIGIMGPRTRGIALEAISR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]