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The map label for this gene is ompA [H]

Identifier: 189353747

GI number: 189353747

Start: 2018116

End: 2018916

Strand: Reverse

Name: ompA [H]

Synonym: BMULJ_04992

Alternate gene names: 189353747

Gene position: 2018916-2018116 (Counterclockwise)

Preceding gene: 189353749

Following gene: 189353745

Centisome position: 81.63

GC content: 67.79

Gene sequence:

>801_bases
ATGAAATTCAAACAGGCCGTGCTGCTTTCGGGGTGCGTCGTGGCTGCCGCCGCGCTGCAGGGATGTGCGACGCCCCATAC
GCCGCCGCAGTTTCCCGATGCGGCGTCCGCATCGCCCGCGGGCGGCACGTTCGTGAACGTCGCGAATCTGCGCAACGTCA
GTACGGGGCTCAACAAGGATCAGCTCTACGATCTGATCGGACCGCCGCAGTTTCATGAGGGGTTCGTCGGCCATCGTGTG
TGGAACTACCTGTTCGACTTCCGACGCGGCGATCAGGTCGTGTCGTGTCAATACCAGGTGCAGTTCGACCGCAACATGCG
CGTGAGCGCGACGTACTGGCGCGACCCGCAATGTGCGGAGTTCGTGCAGCCGTCCGCGGCGCCGGCCGTCGCGCCGGCGG
CCGCGGCAGCGCCCGCACCGCGCGCGCAGTTCACGATCGCAGGCGAGGCGCTGTTCCCGTTTGCGAAGTCGAGCCTCGAT
TCGATGCTGCCGGGCGGGCGCGCCGAGCTCGACGACGCGATCGCGAAAATCCGCGCGGAACGCGGCACGACGCGCATCGA
CGTGGTCGGTCACACCGATCGCATCGGCTCGGATGAAAGCAACCGCGCGCTGTCGCGTGCGCGGGCCGAGACGGTCAAGC
GCTATCTGGTCGCGCACGGGCTCGACGCCGCACGCATCCGCACCGAAGGCGCAGGATCGTCGCAACCCGTGTCGCATTGT
CCGCCCGGCGAATCGCCGGCCGTCATCGCCTGCCTGCAGAAGGACCGGCGCGTGACGATCACCGTGTACGGCCAGGACTG
A

Upstream 100 bases:

>100_bases
ATACGCGCGGCACGTACGGCGCCGTGGTCGGCGCGGGCTATCAGTGGTAACGCGACGAGGCGAGTCGATGCGAAACATCA
AACGGAACAATCAGCGAACC

Downstream 100 bases:

>100_bases
CGCTCGCACCGGCATGCGCGCCCGCGCATGCCGGCGACGATCGATCGCGCGAACCCGTCGCGCAGGCGGCCGTGCGCTAC
GCGAGCCGCAAATCCCACAA

Product: putative OmpA family transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKFKQAVLLSGCVVAAAALQGCATPHTPPQFPDAASASPAGGTFVNVANLRNVSTGLNKDQLYDLIGPPQFHEGFVGHRV
WNYLFDFRRGDQVVSCQYQVQFDRNMRVSATYWRDPQCAEFVQPSAAPAVAPAAAAAPAPRAQFTIAGEALFPFAKSSLD
SMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHC
PPGESPAVIACLQKDRRVTITVYGQD

Sequences:

>Translated_266_residues
MKFKQAVLLSGCVVAAAALQGCATPHTPPQFPDAASASPAGGTFVNVANLRNVSTGLNKDQLYDLIGPPQFHEGFVGHRV
WNYLFDFRRGDQVVSCQYQVQFDRNMRVSATYWRDPQCAEFVQPSAAPAVAPAAAAAPAPRAQFTIAGEALFPFAKSSLD
SMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHC
PPGESPAVIACLQKDRRVTITVYGQD
>Mature_266_residues
MKFKQAVLLSGCVVAAAALQGCATPHTPPQFPDAASASPAGGTFVNVANLRNVSTGLNKDQLYDLIGPPQFHEGFVGHRV
WNYLFDFRRGDQVVSCQYQVQFDRNMRVSATYWRDPQCAEFVQPSAAPAVAPAAAAAPAPRAQFTIAGEALFPFAKSSLD
SMLPGGRAELDDAIAKIRAERGTTRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHC
PPGESPAVIACLQKDRRVTITVYGQD

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=126, Percent_Identity=38.8888888888889, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 28506; Mature: 28506

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKQAVLLSGCVVAAAALQGCATPHTPPQFPDAASASPAGGTFVNVANLRNVSTGLNKD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHCCCCHH
QLYDLIGPPQFHEGFVGHRVWNYLFDFRRGDQVVSCQYQVQFDRNMRVSATYWRDPQCAE
HHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEEECCCCCHHH
FVQPSAAPAVAPAAAAAPAPRAQFTIAGEALFPFAKSSLDSMLPGGRAELDDAIAKIRAE
HCCCCCCCCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RGTTRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHC
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCC
PPGESPAVIACLQKDRRVTITVYGQD
CCCCCCEEEEEECCCCEEEEEEEECC
>Mature Secondary Structure
MKFKQAVLLSGCVVAAAALQGCATPHTPPQFPDAASASPAGGTFVNVANLRNVSTGLNKD
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHCCCCHH
QLYDLIGPPQFHEGFVGHRVWNYLFDFRRGDQVVSCQYQVQFDRNMRVSATYWRDPQCAE
HHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEEEECCCCCHHH
FVQPSAAPAVAPAAAAAPAPRAQFTIAGEALFPFAKSSLDSMLPGGRAELDDAIAKIRAE
HCCCCCCCCCCCHHHCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
RGTTRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHC
CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCCCC
PPGESPAVIACLQKDRRVTITVYGQD
CCCCCCEEEEEECCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]