Click here to switch to the map view.

The map label for this gene is betI [H]

Identifier: 189353734

GI number: 189353734

Start: 2004437

End: 2005021

Strand: Direct

Name: betI [H]

Synonym: BMULJ_04979

Alternate gene names: 189353734

Gene position: 2004437-2005021 (Clockwise)

Preceding gene: 189353731

Following gene: 189353735

Centisome position: 81.05

GC content: 70.94

Gene sequence:

>585_bases
ATGCCGAAAGTCGGAATGCGGGAGATCCGCCGTGCGCAGTTGATCGACGCGACGCTGCGCTCGATCGACGAGGCGGGGCT
GCCCGGCACGACGCTCGCATCGGTCGCGCAGCGCGCGAACATCTCGACCGGCATCGTCAGCCACTACTTCGGCGACAAGG
ACGGGCTGCTCGAAGCGACGATGCGGCACGTGCTGCGCGACTTGTGGTCGGCCACCACGCGCCGCCGCACGGCCGCGCGC
AAGGATCCGCGCTCGCGGCTGCGCGCGATCGTCGCCGCGAACTTCGACGACACGCAGATCGCCGCGCCGGTCATGAAGAC
CTGGCTCGCGTTCTGGTCGCAGAGCATGCACGACCCGATGCTCAAGCGCCTGCAGCACGTGAACACGCGGCGCCTGCATT
CGAACCTGTGCGCCGAGTTCGCGAAAGCGCTGCCGCGCGCGAAGGCGCGCGAGGCCGCCAGCGGCCTGGCCGCGCTGATC
GACGGCCTGTGGCTGCGCGGCGCGCTCGCCGGCGGCCCGATCGACACCCGGGCGGCGCTGAAGCTGGCCCACGACTACAT
CGACCTGCTGCTCGCGTCCGACTGA

Upstream 100 bases:

>100_bases
GTTGCGTCCGACCCCGGTTTTTTGTTGATTGAACGTTCAATAAAAAACCGCTAAGCTGCGGACTTTCATCGACGGCCCAC
CCTGGGCGACAGGAGTCACG

Downstream 100 bases:

>100_bases
CGCGCGGCAGGCGCCTTCAAGGAGATCCTCATGTCCGTATACGGTTTGCAGCGGCTCTACATCGGCGGCGGTTACGTCGA
CGCGACGAGCGGCAAGACTT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 193

Protein sequence:

>194_residues
MPKVGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWSATTRRRTAAR
KDPRSRLRAIVAANFDDTQIAAPVMKTWLAFWSQSMHDPMLKRLQHVNTRRLHSNLCAEFAKALPRAKAREAASGLAALI
DGLWLRGALAGGPIDTRAALKLAHDYIDLLLASD

Sequences:

>Translated_194_residues
MPKVGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWSATTRRRTAAR
KDPRSRLRAIVAANFDDTQIAAPVMKTWLAFWSQSMHDPMLKRLQHVNTRRLHSNLCAEFAKALPRAKAREAASGLAALI
DGLWLRGALAGGPIDTRAALKLAHDYIDLLLASD
>Mature_193_residues
PKVGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEATMRHVLRDLWSATTRRRTAARK
DPRSRLRAIVAANFDDTQIAAPVMKTWLAFWSQSMHDPMLKRLQHVNTRRLHSNLCAEFAKALPRAKAREAASGLAALID
GLWLRGALAGGPIDTRAALKLAHDYIDLLLASD

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=195, Percent_Identity=55.3846153846154, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21387; Mature: 21256

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
MRHVLRDLWSATTRRRTAARKDPRSRLRAIVAANFDDTQIAAPVMKTWLAFWSQSMHDPM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LKRLQHVNTRRLHSNLCAEFAKALPRAKAREAASGLAALIDGLWLRGALAGGPIDTRAAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KLAHDYIDLLLASD
HHHHHHHHHHHCCC
>Mature Secondary Structure 
PKVGMREIRRAQLIDATLRSIDEAGLPGTTLASVAQRANISTGIVSHYFGDKDGLLEAT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHH
MRHVLRDLWSATTRRRTAARKDPRSRLRAIVAANFDDTQIAAPVMKTWLAFWSQSMHDPM
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LKRLQHVNTRRLHSNLCAEFAKALPRAKAREAASGLAALIDGLWLRGALAGGPIDTRAAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
KLAHDYIDLLLASD
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA