Click here to switch to the map view.

The map label for this gene is ycjY [C]

Identifier: 189353602

GI number: 189353602

Start: 1857820

End: 1858764

Strand: Reverse

Name: ycjY [C]

Synonym: BMULJ_04846

Alternate gene names: 189353602

Gene position: 1858764-1857820 (Counterclockwise)

Preceding gene: 189353603

Following gene: 189353601

Centisome position: 75.16

GC content: 67.94

Gene sequence:

>945_bases
ATGCTCAGCTTCGATTCCAGGTTTCCGAGCGAGGGCGAGGATTGCGCCGGGACGCTCATGCTGCCGGACGGCAACGGCAG
ACCGCCCGTCATCGTCATGGCGCACGGCTTCGGCGCGATCCGCGCGGCCGGCCTGTATGCGTTTGCGCGGCGCTTCGTTG
CGCACGGGTACGCGGTGTATCTGTTCGACTATCGCAACTTCGGCGACAGCGGCGGCATGCCGCGGCACTGGGTCAGCCCG
CGCCGACACCTCGCCGACTGGGCCGCGGCCGTTGCGCATGTCCGGACGCTGCCCGGTATCGACCGGGAGCGCATCGTGTT
GTGGGGCACCTCGTTTTCCGGCGGGCATGTGATCCGGACGGCCGCGAACGACCGGCGCATTCACGCCGTGATTGCCCAGG
TGCCGCATGTGAGCGGCATCGCCAGCGTCCGGCAGGTGCCCCTGCATGTGCTGGCGCGATTGAGCATGGCGGCGCTGCTC
GACCATGGTGGCAGGCTGTTCGGCCGTCCTTATTACCGGCCGATCGTCGGGCGTCCGGGCGATGTCGCAGCGCTGACGAG
CGCCGAATGCCGGGAGGGCTACGAGCGGCTGCTCCCCGCAGGCGCGAACTGGGAAAACAAGACGCTTGCGCGGGTTTTCC
TCGAAGTGCCGTTTTATAGTCCGATCCGTTCGGCCCGTCGCGTCACGGCGCCGACGCTGATCGTCGCCGGTCGGCGCGAT
ACGGTCACGCCGGCTTCGGCGGCGTGGCGCGCGGCGGTGCGCATTCCGCAGTGCGAATTTCATCTGCTGGATGGCAACCA
TTTCGAGCTTCATCTGGAAGACGAGGCGGTTTGCATGCAGAGTATCGAACTGCAGCTCGGCTTTCTGGACCGGCACGTCG
GCCTTGGGGAGCCGGTCCGGACCGAGGTCGGCGTGCCGCGCGTGCCGGCGTCGCCTCTCGCATGA

Upstream 100 bases:

>100_bases
TTCCGCACTGGTATTCCGCCGTGCGGCGTCCGGTGCCGATGCGGCCGCTGTCGCCGGTCTGGCCGGCGGGCAGCCCGCAT
CCGCGTGACGGGAGTCGATC

Downstream 100 bases:

>100_bases
CGATGCGTGCGGGAATGAATGGCGGTGACGGCCGGTGCAAGGAGATCGAGTGGTGAGTAAAGCGTTGATGATTTACGGCG
CATACGGCTATACGGGTGAA

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLSFDSRFPSEGEDCAGTLMLPDGNGRPPVIVMAHGFGAIRAAGLYAFARRFVAHGYAVYLFDYRNFGDSGGMPRHWVSP
RRHLADWAAAVAHVRTLPGIDRERIVLWGTSFSGGHVIRTAANDRRIHAVIAQVPHVSGIASVRQVPLHVLARLSMAALL
DHGGRLFGRPYYRPIVGRPGDVAALTSAECREGYERLLPAGANWENKTLARVFLEVPFYSPIRSARRVTAPTLIVAGRRD
TVTPASAAWRAAVRIPQCEFHLLDGNHFELHLEDEAVCMQSIELQLGFLDRHVGLGEPVRTEVGVPRVPASPLA

Sequences:

>Translated_314_residues
MLSFDSRFPSEGEDCAGTLMLPDGNGRPPVIVMAHGFGAIRAAGLYAFARRFVAHGYAVYLFDYRNFGDSGGMPRHWVSP
RRHLADWAAAVAHVRTLPGIDRERIVLWGTSFSGGHVIRTAANDRRIHAVIAQVPHVSGIASVRQVPLHVLARLSMAALL
DHGGRLFGRPYYRPIVGRPGDVAALTSAECREGYERLLPAGANWENKTLARVFLEVPFYSPIRSARRVTAPTLIVAGRRD
TVTPASAAWRAAVRIPQCEFHLLDGNHFELHLEDEAVCMQSIELQLGFLDRHVGLGEPVRTEVGVPRVPASPLA
>Mature_314_residues
MLSFDSRFPSEGEDCAGTLMLPDGNGRPPVIVMAHGFGAIRAAGLYAFARRFVAHGYAVYLFDYRNFGDSGGMPRHWVSP
RRHLADWAAAVAHVRTLPGIDRERIVLWGTSFSGGHVIRTAANDRRIHAVIAQVPHVSGIASVRQVPLHVLARLSMAALL
DHGGRLFGRPYYRPIVGRPGDVAALTSAECREGYERLLPAGANWENKTLARVFLEVPFYSPIRSARRVTAPTLIVAGRRD
TVTPASAAWRAAVRIPQCEFHLLDGNHFELHLEDEAVCMQSIELQLGFLDRHVGLGEPVRTEVGVPRVPASPLA

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ycjY [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 34443; Mature: 34443

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFDSRFPSEGEDCAGTLMLPDGNGRPPVIVMAHGFGAIRAAGLYAFARRFVAHGYAVY
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEE
LFDYRNFGDSGGMPRHWVSPRRHLADWAAAVAHVRTLPGIDRERIVLWGTSFSGGHVIRT
EEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEE
AANDRRIHAVIAQVPHVSGIASVRQVPLHVLARLSMAALLDHGGRLFGRPYYRPIVGRPG
CCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DVAALTSAECREGYERLLPAGANWENKTLARVFLEVPFYSPIRSARRVTAPTLIVAGRRD
CEEEECHHHHHHHHHHHCCCCCCCCCHHEEHHHEECCCCHHHHHHHHCCCCEEEEECCCC
TVTPASAAWRAAVRIPQCEFHLLDGNHFELHLEDEAVCMQSIELQLGFLDRHVGLGEPVR
CCCCHHHHHHHHEECCCCEEEEECCCEEEEEECHHHHHHHHHHHEEEEHHHCCCCCCCCH
TEVGVPRVPASPLA
HCCCCCCCCCCCCC
>Mature Secondary Structure
MLSFDSRFPSEGEDCAGTLMLPDGNGRPPVIVMAHGFGAIRAAGLYAFARRFVAHGYAVY
CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEE
LFDYRNFGDSGGMPRHWVSPRRHLADWAAAVAHVRTLPGIDRERIVLWGTSFSGGHVIRT
EEEECCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEE
AANDRRIHAVIAQVPHVSGIASVRQVPLHVLARLSMAALLDHGGRLFGRPYYRPIVGRPG
CCCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DVAALTSAECREGYERLLPAGANWENKTLARVFLEVPFYSPIRSARRVTAPTLIVAGRRD
CEEEECHHHHHHHHHHHCCCCCCCCCHHEEHHHEECCCCHHHHHHHHCCCCEEEEECCCC
TVTPASAAWRAAVRIPQCEFHLLDGNHFELHLEDEAVCMQSIELQLGFLDRHVGLGEPVR
CCCCHHHHHHHHEECCCCEEEEECCCEEEEEECHHHHHHHHHHHEEEEHHHCCCCCCCCH
TEVGVPRVPASPLA
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916281 [H]