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The map label for this gene is nudF [H]

Identifier: 189353599

GI number: 189353599

Start: 1853429

End: 1854028

Strand: Reverse

Name: nudF [H]

Synonym: BMULJ_04843

Alternate gene names: 189353599

Gene position: 1854028-1853429 (Counterclockwise)

Preceding gene: 189353601

Following gene: 189353598

Centisome position: 74.97

GC content: 57.33

Gene sequence:

>600_bases
ATGCGTGCAACGAGAGACCGGGTTCGTATCGTCGAGTCCACCGTACTATCCGACAATTGGTACACGCTGACGAAGGTGAC
GTTCGATTTCCTGCGCCGAGACGGCACGTGGCAGCGTCAAAGCAGGGAAACCTACGATCGCGGCAACGGTGCCACGATTC
TGTTGTATTGCCGGCACACAGGAAATGTCGTGCTGACGCGCCAGTTTCGGATGCCCGTGTTCGTCAACGGACACGACGGC
ATGTTGATCGAGGCGGCCGCGGGTTTGCTTGACAACGCCACGCCGGAAGAGCGCATACGCCAGGAGGCGGAAGAGGAGAC
TGGGTACCGCGTGAACAATATCCGCAAGGTCTTTGAGGCTTACATGAGTCCAGGATCAGTGACCGAGAAGCTCTATTTCT
ATCTGGGGGACTACGACGCGTCCATGCGCGTAAATGATGGCGGCGGTATCGAAGACGAGGGAGAAGATCTCGAGGTGCTC
GAAATGCCGCTGCGGACCGCTTTGCGGTTGGTTAGAAGCGGCGAGATCGTCGACGGCAAGACGATCATGCTGTTACAGCA
CCTGGCATTAAGCGAAATCATGGAGGGACGCCAAGCATGA

Upstream 100 bases:

>100_bases
TCTTACGTTGGGTCGTTAGCATGGATCTGCACGAAATATCTTGATATTGCACGAAGCTGCACGATACCATGAACGCTCTT
TACTGTGGACGGGAGACGCC

Downstream 100 bases:

>100_bases
GGCCGCAACTGATCCTGATTGCGGGCCCGTATCGCAGTGGAACCAACGGCGATCCGGCTCGCATTGCCGACAACCTGGTT
AGACTGGAACGGGCCGCATT

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRATRDRVRIVESTVLSDNWYTLTKVTFDFLRRDGTWQRQSRETYDRGNGATILLYCRHTGNVVLTRQFRMPVFVNGHDG
MLIEAAAGLLDNATPEERIRQEAEEETGYRVNNIRKVFEAYMSPGSVTEKLYFYLGDYDASMRVNDGGGIEDEGEDLEVL
EMPLRTALRLVRSGEIVDGKTIMLLQHLALSEIMEGRQA

Sequences:

>Translated_199_residues
MRATRDRVRIVESTVLSDNWYTLTKVTFDFLRRDGTWQRQSRETYDRGNGATILLYCRHTGNVVLTRQFRMPVFVNGHDG
MLIEAAAGLLDNATPEERIRQEAEEETGYRVNNIRKVFEAYMSPGSVTEKLYFYLGDYDASMRVNDGGGIEDEGEDLEVL
EMPLRTALRLVRSGEIVDGKTIMLLQHLALSEIMEGRQA
>Mature_199_residues
MRATRDRVRIVESTVLSDNWYTLTKVTFDFLRRDGTWQRQSRETYDRGNGATILLYCRHTGNVVLTRQFRMPVFVNGHDG
MLIEAAAGLLDNATPEERIRQEAEEETGYRVNNIRKVFEAYMSPGSVTEKLYFYLGDYDASMRVNDGGGIEDEGEDLEVL
EMPLRTALRLVRSGEIVDGKTIMLLQHLALSEIMEGRQA

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=190, Percent_Identity=52.6315789473684, Blast_Score=207, Evalue=3e-55,
Organism=Escherichia coli, GI1789412, Length=150, Percent_Identity=30, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22760; Mature: 22760

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRATRDRVRIVESTVLSDNWYTLTKVTFDFLRRDGTWQRQSRETYDRGNGATILLYCRHT
CCCCHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEECC
GNVVLTRQFRMPVFVNGHDGMLIEAAAGLLDNATPEERIRQEAEEETGYRVNNIRKVFEA
CCEEEEEEECCCEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
YMSPGSVTEKLYFYLGDYDASMRVNDGGGIEDEGEDLEVLEMPLRTALRLVRSGEIVDGK
HCCCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCH
TIMLLQHLALSEIMEGRQA
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRATRDRVRIVESTVLSDNWYTLTKVTFDFLRRDGTWQRQSRETYDRGNGATILLYCRHT
CCCCHHHHHHHHHHEECCCCEEHHHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEEECC
GNVVLTRQFRMPVFVNGHDGMLIEAAAGLLDNATPEERIRQEAEEETGYRVNNIRKVFEA
CCEEEEEEECCCEEEECCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH
YMSPGSVTEKLYFYLGDYDASMRVNDGGGIEDEGEDLEVLEMPLRTALRLVRSGEIVDGK
HCCCCCHHHEEEEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCH
TIMLLQHLALSEIMEGRQA
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA