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The map label for this gene is ftrA [H]

Identifier: 189353574

GI number: 189353574

Start: 1826054

End: 1827028

Strand: Reverse

Name: ftrA [H]

Synonym: BMULJ_04818

Alternate gene names: 189353574

Gene position: 1827028-1826054 (Counterclockwise)

Preceding gene: 189353577

Following gene: 189353573

Centisome position: 73.87

GC content: 69.13

Gene sequence:

>975_bases
ATGAAAAATCATCTCGTCGTTGCACTCGCCTACGATCGGCTCTGCACGTTCGAATTCGGCTGCGTGGTCGAACTGTTCGC
GCTCGACCGTCCTGAACTCGGCGTCGACTGGTATCGCTTCGCGGTTTGCGCCAGCGAGCCGGGGCCGGTGCGCGCGGCAG
GCGGCATCACGGTCGCCGCGCCGTACCGGCTCGCGACGCTCGATCGCGCAGACACGATCGTGATTCCCGGCTGGCGCGAT
GCGGACGAACTGCCGCCGGAACCGCTGCTGAAGAAGCTGCGCGCCGCGCATCGTCGCGGCGCGCGGCTCTGTTCGATCTG
CTCGGGCGTGTTCGTGCTCGCGGCGGCCGGCGTGCTCGACGGCCTCACCGTGACGACGCACTGGCGCTACGCGGAGAAAC
TGCAGGCGCGCTATCCGGCGCTGCGCGTGAATCCCGACGCGCTTTACGTCGACGAAGGGCAGATCATCACGTCGGCCGGA
TCGGCGGCCGGCCTCGACATGCTGCTGCATCTGGTGCGACGCGATCACGGCGGCGCGATCGCGAACCGCGTCGCGCAGCG
TCTCGTGTTGCCGCCGCATCGCGACGGCGGACAGGCGCAGTTCGTACCGCGCCCCGTTGCACCGGGCGGCACGGACCGGC
TCGCGAAACTGATCGACTGGATGCGCGCGCACGCGGCGCAGCCGCATACGCTGGCCTCGCTCGCCGCGCAAGCCGCGATG
AGCCCGCGCACGTTGCAGCGGCAGTTCGCGGATGCGACGGGGATGTCGCCGCTTGCCTGGTTGATTCGGGAGCGCGTGAA
CGTCGCGAAGGATCTGCTCGAAACGCATCCGGCGCTGTCGCTCGCGCAGGTCGCAGCGCGGGCGGGCTTTGGTTCGGAAG
AATCGCTGCGCCGGCATTTCCGGCGCGTCGCGGCGACGAGTCCGGCCGCTTATCGGCGCGAGATGGATCATGGCGTAAGA
TCCGGGAGCGCTTGA

Upstream 100 bases:

>100_bases
TCCTCGAAAAGGGCGCGATGTGCGCGATCGGAGGCCAGTATCGCGGTTTCGTGCGCGGCGCGGCAGTGGCGCGATCGACA
AGTTCCGGTAACATCGCGCC

Downstream 100 bases:

>100_bases
GCGATCCACTTCGCCGCGACGTAGCGCGCGATCGCCGCGCAGCGGCGCGAAGCACGCCGCGCCATTCACGCAAGATCATG
ACAAGGACAATCCCGATGGG

Product: transcriptional activator FtrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKNHLVVALAYDRLCTFEFGCVVELFALDRPELGVDWYRFAVCASEPGPVRAAGGITVAAPYRLATLDRADTIVIPGWRD
ADELPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGLTVTTHWRYAEKLQARYPALRVNPDALYVDEGQIITSAG
SAAGLDMLLHLVRRDHGGAIANRVAQRLVLPPHRDGGQAQFVPRPVAPGGTDRLAKLIDWMRAHAAQPHTLASLAAQAAM
SPRTLQRQFADATGMSPLAWLIRERVNVAKDLLETHPALSLAQVAARAGFGSEESLRRHFRRVAATSPAAYRREMDHGVR
SGSA

Sequences:

>Translated_324_residues
MKNHLVVALAYDRLCTFEFGCVVELFALDRPELGVDWYRFAVCASEPGPVRAAGGITVAAPYRLATLDRADTIVIPGWRD
ADELPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGLTVTTHWRYAEKLQARYPALRVNPDALYVDEGQIITSAG
SAAGLDMLLHLVRRDHGGAIANRVAQRLVLPPHRDGGQAQFVPRPVAPGGTDRLAKLIDWMRAHAAQPHTLASLAAQAAM
SPRTLQRQFADATGMSPLAWLIRERVNVAKDLLETHPALSLAQVAARAGFGSEESLRRHFRRVAATSPAAYRREMDHGVR
SGSA
>Mature_324_residues
MKNHLVVALAYDRLCTFEFGCVVELFALDRPELGVDWYRFAVCASEPGPVRAAGGITVAAPYRLATLDRADTIVIPGWRD
ADELPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLDGLTVTTHWRYAEKLQARYPALRVNPDALYVDEGQIITSAG
SAAGLDMLLHLVRRDHGGAIANRVAQRLVLPPHRDGGQAQFVPRPVAPGGTDRLAKLIDWMRAHAAQPHTLASLAAQAAM
SPRTLQRQFADATGMSPLAWLIRERVNVAKDLLETHPALSLAQVAARAGFGSEESLRRHFRRVAATSPAAYRREMDHGVR
SGSA

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35192; Mature: 35192

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHLVVALAYDRLCTFEFGCVVELFALDRPELGVDWYRFAVCASEPGPVRAAGGITVAA
CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEC
PYRLATLDRADTIVIPGWRDADELPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLD
CCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GLTVTTHWRYAEKLQARYPALRVNPDALYVDEGQIITSAGSAAGLDMLLHLVRRDHGGAI
CCEEEEHHHHHHHHHHHCCEEEECCCEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCHH
ANRVAQRLVLPPHRDGGQAQFVPRPVAPGGTDRLAKLIDWMRAHAAQPHTLASLAAQAAM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SPRTLQRQFADATGMSPLAWLIRERVNVAKDLLETHPALSLAQVAARAGFGSEESLRRHF
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RRVAATSPAAYRREMDHGVRSGSA
HHHHHCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKNHLVVALAYDRLCTFEFGCVVELFALDRPELGVDWYRFAVCASEPGPVRAAGGITVAA
CCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEC
PYRLATLDRADTIVIPGWRDADELPPEPLLKKLRAAHRRGARLCSICSGVFVLAAAGVLD
CCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
GLTVTTHWRYAEKLQARYPALRVNPDALYVDEGQIITSAGSAAGLDMLLHLVRRDHGGAI
CCEEEEHHHHHHHHHHHCCEEEECCCEEEEECCEEEECCCCHHHHHHHHHHHHHCCCCHH
ANRVAQRLVLPPHRDGGQAQFVPRPVAPGGTDRLAKLIDWMRAHAAQPHTLASLAAQAAM
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
SPRTLQRQFADATGMSPLAWLIRERVNVAKDLLETHPALSLAQVAARAGFGSEESLRRHF
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH
RRVAATSPAAYRREMDHGVRSGSA
HHHHHCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]