Click here to switch to the map view.

The map label for this gene is ycaQ [H]

Identifier: 189353542

GI number: 189353542

Start: 1780972

End: 1782183

Strand: Direct

Name: ycaQ [H]

Synonym: BMULJ_04786

Alternate gene names: 189353542

Gene position: 1780972-1782183 (Clockwise)

Preceding gene: 189353541

Following gene: 189353545

Centisome position: 72.01

GC content: 68.81

Gene sequence:

>1212_bases
ATGTCCACCCTCTCGCTTGCCGCTGCCCGCGCGCTGCATCTCGCCGCGCAGGGCCTGCTCACGCCGCCGCGCCGCAAGGC
GACCAAGGCCGACGTGCTCGACACGATCCGCCGCATGGCGCAGTTGCAGATCGATACCATTCACGTCGTCGCACGCAGCC
CCTATCTCGTGCTGTTCAGCCGCCTCGGCGCGTTCCGGCCGCAATGGCTCGACGAGCATCTCGCCGAAGCGCGGCTGTTC
GAATACTGGTCGCACGAGGCGTGCTTCCTGCCCGTCGAGCAGTTCGGGCTGATGCGTTACAAGATGCTCGATCCGTCCGG
GATGGGATGGAAATACGCGGCCGACTGGCATGCGCAGCACCGCGACGAAATCGCGCGGCTGCTCGACAGGATTCGCTCGC
AAGGCCCGGTGCGCTCCGCGGATTTCGTGCGCGCGGACGGCACGAAAGGCAACGGGTGGTGGGACCGCAAGCCGGAGAAG
CGGCATCTCGAAGTGCTGTTCACGACCGGCGACCTGATGGTCGCCGAGCGCCGCAATTTCCAGCGCATCTACGACGTGCG
CGAGCGCGTGCTGCCCGACTGGGACGACGCGCGCGACCTGCCGCCGCGCGAAGCCGTGCTGCCGACGCTGCTCGATTACA
CGTGCCGCGCGCTCGGCATCGTCCGCGCGGACTGGGTCGCCGATTACTACCGGCTGCCGCGCCGCTCGTATCGCGCGGAA
CTCGAACAGCTCGCGCAGGCCGGCGAGCTGATTCCGGTGCAGGTCGCAGACTGGACGGAACCGGCCTTCGTGCATCGTTC
GCTCGAGGCGTTGCTGCCCGCGGCGGCTGCCGACACGCTGCGCTCGACCGTCACGACGCTGCTGTCGCCGTTCGATCCGG
TCGTATGGGATCGCCGCCGCGCGGCGACGCTGTTCGACTTCGACTATACGATCGAGTGCTATACGCCCGCGCACAAGCGG
CGTTACGGCTATTTCTGCCTGCCCGTGCTGCATCGCGGCCGCCTGATCGGCCGCGTCGACGCGAAAGCGCATCGCGCGCT
CGGCACGTTCGAGCTGAAGTCCGTGCATCTCGAGCCCGGCGTGCGCGTCGGCAGCGGGCTCGCGGCCGATGTCGCGAAAG
CCGTCAGAAAACTCGCGGCCTGGCATGGCACGCCGCAGATCACCGTCGCGCACGCGCCGCCCGAACTCGCGCACGCGCTG
CGCGACGCGTGA

Upstream 100 bases:

>100_bases
TGCCGCACCGACCGTTCGCTACCGAAACGTCCGCCACACCACGCGCAGGCAAACTCCGCTTACGATGTACGCGTTGCCGA
CTCCGCTCCCGATCGCCTCG

Downstream 100 bases:

>100_bases
CGGCGAGCCGAGCGCCGCGCCGGTTCAGTCGCGCAGCTTGCGAAAACGCGGCGTGCCGTCCGGCAGCGTCTCGTTGAACA
TCGTTTCCGGCCGCACCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSTLSLAAARALHLAAQGLLTPPRRKATKADVLDTIRRMAQLQIDTIHVVARSPYLVLFSRLGAFRPQWLDEHLAEARLF
EYWSHEACFLPVEQFGLMRYKMLDPSGMGWKYAADWHAQHRDEIARLLDRIRSQGPVRSADFVRADGTKGNGWWDRKPEK
RHLEVLFTTGDLMVAERRNFQRIYDVRERVLPDWDDARDLPPREAVLPTLLDYTCRALGIVRADWVADYYRLPRRSYRAE
LEQLAQAGELIPVQVADWTEPAFVHRSLEALLPAAAADTLRSTVTTLLSPFDPVVWDRRRAATLFDFDYTIECYTPAHKR
RYGYFCLPVLHRGRLIGRVDAKAHRALGTFELKSVHLEPGVRVGSGLAADVAKAVRKLAAWHGTPQITVAHAPPELAHAL
RDA

Sequences:

>Translated_403_residues
MSTLSLAAARALHLAAQGLLTPPRRKATKADVLDTIRRMAQLQIDTIHVVARSPYLVLFSRLGAFRPQWLDEHLAEARLF
EYWSHEACFLPVEQFGLMRYKMLDPSGMGWKYAADWHAQHRDEIARLLDRIRSQGPVRSADFVRADGTKGNGWWDRKPEK
RHLEVLFTTGDLMVAERRNFQRIYDVRERVLPDWDDARDLPPREAVLPTLLDYTCRALGIVRADWVADYYRLPRRSYRAE
LEQLAQAGELIPVQVADWTEPAFVHRSLEALLPAAAADTLRSTVTTLLSPFDPVVWDRRRAATLFDFDYTIECYTPAHKR
RYGYFCLPVLHRGRLIGRVDAKAHRALGTFELKSVHLEPGVRVGSGLAADVAKAVRKLAAWHGTPQITVAHAPPELAHAL
RDA
>Mature_402_residues
STLSLAAARALHLAAQGLLTPPRRKATKADVLDTIRRMAQLQIDTIHVVARSPYLVLFSRLGAFRPQWLDEHLAEARLFE
YWSHEACFLPVEQFGLMRYKMLDPSGMGWKYAADWHAQHRDEIARLLDRIRSQGPVRSADFVRADGTKGNGWWDRKPEKR
HLEVLFTTGDLMVAERRNFQRIYDVRERVLPDWDDARDLPPREAVLPTLLDYTCRALGIVRADWVADYYRLPRRSYRAEL
EQLAQAGELIPVQVADWTEPAFVHRSLEALLPAAAADTLRSTVTTLLSPFDPVVWDRRRAATLFDFDYTIECYTPAHKRR
YGYFCLPVLHRGRLIGRVDAKAHRALGTFELKSVHLEPGVRVGSGLAADVAKAVRKLAAWHGTPQITVAHAPPELAHALR
DA

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=394, Percent_Identity=53.0456852791878, Blast_Score=405, Evalue=1e-114,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 45904; Mature: 45773

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLSLAAARALHLAAQGLLTPPRRKATKADVLDTIRRMAQLQIDTIHVVARSPYLVLFS
CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
RLGAFRPQWLDEHLAEARLFEYWSHEACFLPVEQFGLMRYKMLDPSGMGWKYAADWHAQH
HHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEEEEECCCCCCCEEECCHHHHH
RDEIARLLDRIRSQGPVRSADFVRADGTKGNGWWDRKPEKRHLEVLFTTGDLMVAERRNF
HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEHHHHHH
QRIYDVRERVLPDWDDARDLPPREAVLPTLLDYTCRALGIVRADWVADYYRLPRRSYRAE
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQLAQAGELIPVQVADWTEPAFVHRSLEALLPAAAADTLRSTVTTLLSPFDPVVWDRRR
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
AATLFDFDYTIECYTPAHKRRYGYFCLPVLHRGRLIGRVDAKAHRALGTFELKSVHLEPG
CCEEEECCEEEEEECCHHHCCCCEEEHHHHHCCCEEEECCHHHHHHHCCEEEEEEECCCC
VRVGSGLAADVAKAVRKLAAWHGTPQITVAHAPPELAHALRDA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCC
>Mature Secondary Structure 
STLSLAAARALHLAAQGLLTPPRRKATKADVLDTIRRMAQLQIDTIHVVARSPYLVLFS
CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
RLGAFRPQWLDEHLAEARLFEYWSHEACFLPVEQFGLMRYKMLDPSGMGWKYAADWHAQH
HHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHCCEEEEEECCCCCCCEEECCHHHHH
RDEIARLLDRIRSQGPVRSADFVRADGTKGNGWWDRKPEKRHLEVLFTTGDLMVAERRNF
HHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEECCCEEEHHHHHH
QRIYDVRERVLPDWDDARDLPPREAVLPTLLDYTCRALGIVRADWVADYYRLPRRSYRAE
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LEQLAQAGELIPVQVADWTEPAFVHRSLEALLPAAAADTLRSTVTTLLSPFDPVVWDRRR
HHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
AATLFDFDYTIECYTPAHKRRYGYFCLPVLHRGRLIGRVDAKAHRALGTFELKSVHLEPG
CCEEEECCEEEEEECCHHHCCCCEEEHHHHHCCCEEEECCHHHHHHHCCEEEEEEECCCC
VRVGSGLAADVAKAVRKLAAWHGTPQITVAHAPPELAHALRDA
CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]