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The map label for this gene is yscV [H]

Identifier: 189353534

GI number: 189353534

Start: 1769943

End: 1772132

Strand: Reverse

Name: yscV [H]

Synonym: BMULJ_04778

Alternate gene names: 189353534

Gene position: 1772132-1769943 (Counterclockwise)

Preceding gene: 189353535

Following gene: 189353533

Centisome position: 71.65

GC content: 69.68

Gene sequence:

>2190_bases
ATGGCAGAACCGAAGGCGCTTCCCCGCGACTGGCAGCGGATGTTTTCCGTCGGCCGCGGCGTGTCCGGACATCGCCGGAT
CGGCGCGTCGCCGCGCGCCGATCTGTTTCTTGCCGCCTTCATCGTCGCCGTCGTCGCGCTGTTCATCCTGCCGCTGCCGC
AGGCCGCGCTCGACGGGATGATCTCGCTGAATCTGGCCGCAAGCGTCGTACTGCTGACCGTGTCGACCTACGTGCCGTCG
GCGGTCAGCTTCTCGTCGTTTCCCGCGCTGCTGCTGTTTACGACGCTGTTCCGGCTCGCGCTGAACATCGCGTCGTGCAA
GCTGATCCTGCTGCACGCGAACGCCGGTCACGTCATCGATGCGTTCGGGCGGCTCGTGGTCGGCAACAACGTCGTCGTCG
GCGGTGTCGTGTTTCTCGTGATCGCCGTCGTGCAGTTCATCGTGATCGCGAAAGGCTCGGAGCGCGTGGCCGAGGTCGGC
GCGCGCTTTTCGCTCGACGCGATGCCGGGCAAGCAGATGAGCATCGACGCGGATCTGCGCGCCGGCATCATCAGCGCGGA
CGAAGCGCGCGAGCGTCGCGAGAAGCTCGAGCAGGAATCGCAGATGCACGGTGCGATGGACGGCGCGATGAAGTTCGTGA
AGGGCGACGCGATCGCCGGCCTCGTGATCGCGTTCATCAACATCGTCGCGGGCATCGCGGTCGGCACGCTGATGCACGGC
ATGGACATCGGCACGGCGCTGCAGCGCTACGCGATCCTGACGGTCGGCGACGGCATGGCGTCGCAGATTCCGTCGCTGCT
CGTGTCGATCGCGGCCGGCATCGTGACGACGCGCGTCGCGACGCGCGATGCGCGGCAGCGCCAGCTCGGCGAGCAGCTGG
GCGAACAGCTCGGCGCGCATCCGCGTGCGCTGCTGATCGCGGCGCTCGTGCTGGCCGGCTTCCTCGTCGTGCCCGGTTTT
CCGAAATGGTCGTTCGCGCTGATCGCCGTGGCGCTCGGCGCGTTCGCGCTGACGCAGCTCAAGCGCAAGACGACCGCACC
GAGCTTCAACCTGATCCACGTGGCCGGGCGTGTCGGCGCGGCCGACGACGGGCAGCCGGCGAAGGTATCGCACGCGGCGG
GCGTCACGTCGCTGATCGCGGTATCGCTGGCCGACGATCTGCGCAGCGCGCTGAACCTCGCGCAGCTGCAGGCCGCCCTG
TCGAACGCGAAGGCGCGCGTCGACGCGGACATCGGCACGGTGTTCCCGCGCATCACGCTGAACGACGACGAGCGCGCGCC
GGCCGGCACGTACCGCATCTATCTGCAGGACGTGCTCGCCGCGCACGGTGCGCTGAAGCCCGGCTGGCTGCTGTGGGACG
GCGTCGCGCCGCTGCCCGAGCGCGCGGAGCGTCAGCCGGCCGAAGCGTTCGGCCCGTTCGCGACGGCACTGTGGGTCAAG
CCGGACGGCGCGCCGCCGGACGGCAAGTGGTTGACGAGCGAGGCGGCGCTCGCCGCGCACGTCGAGCAGATCGTGCGCGA
GCACGCGGACGAACTGCTCGGCATCCAGGAGACGCAGGCGCTCGTGCATCTGGTGCGGCGCGATCACCCGGAGCTCGTCG
GCGAACTGACGCGGCTCGTGCCGCTGCAGCGCGTGACCGAGGTGCTGCGCCGGCTGCTCGCCGAGCAGGTGCCGATCCGC
AATCTGCGCGTGATCTTCGAAAGCCTGATCACGTGGGCGCCGAACGAGCCCGACGACGTGATCGCGCTCGTCGAGCTCGT
GCGCGTCGACCTGCGCCGGATGATCACCGATCGCCACGCGGGCGCCGCGCGCCAGCTGCGCGTCGTGCTGTTCGAGCAGA
ACCTGCAGGAGCGCATCGAGAACGCGGTGATGCGCACGAAGCAGGGCAACTTCCTCGCGCTGTCGAGCGCCGTGAAGCAG
GACATCGGCGAGCAGGTGCGCGCCATCGTGCAATCGGCGCACGCGAGCGGCGCGCACGGCGCCGCGCGGCTCGCCGTGAT
GGTCGCGCTCGGCGCGCGCCGCTACGTGAAGACGATCCTGCAGCCGATGCTGCCCGATCTTCCGGTGCTGTCGTATCAGG
AGATCGAGGAGGACGTGCAGCTGCATACGGTCGGCTGGGTCAAGAACCCGCCGGACGACGGCACGGTCGGCGCCGGCGCC
GACGTGCGTACACCGGGCGTCGCGCAATGA

Upstream 100 bases:

>100_bases
CCCCTTTTCCCGTCGCTACACTCGTCGCATTCGATGCACCGCGCAGGCGGGGGCTGCGATTGCCCGCGCCTGCCGCCCAT
AACGACAGGACGACGGCACG

Downstream 100 bases:

>100_bases
CGAGCTCGACGATCCTCGATCTCACGCGGCAGGCGCTGATGCTCGTGCTGCTGCTGTCGCTGCCGATCGTGCTGATCGCG
ACGGTCACGGGGCTCGTCGT

Product: type III secretion protein SctV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 729; Mature: 728

Protein sequence:

>729_residues
MAEPKALPRDWQRMFSVGRGVSGHRRIGASPRADLFLAAFIVAVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPS
AVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVG
ARFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG
MDIGTALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLIAALVLAGFLVVPGF
PKWSFALIAVALGAFALTQLKRKTTAPSFNLIHVAGRVGAADDGQPAKVSHAAGVTSLIAVSLADDLRSALNLAQLQAAL
SNAKARVDADIGTVFPRITLNDDERAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWVK
PDGAPPDGKWLTSEAALAAHVEQIVREHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRVTEVLRRLLAEQVPIR
NLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGAARQLRVVLFEQNLQERIENAVMRTKQGNFLALSSAVKQ
DIGEQVRAIVQSAHASGAHGAARLAVMVALGARRYVKTILQPMLPDLPVLSYQEIEEDVQLHTVGWVKNPPDDGTVGAGA
DVRTPGVAQ

Sequences:

>Translated_729_residues
MAEPKALPRDWQRMFSVGRGVSGHRRIGASPRADLFLAAFIVAVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPS
AVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVG
ARFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG
MDIGTALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLIAALVLAGFLVVPGF
PKWSFALIAVALGAFALTQLKRKTTAPSFNLIHVAGRVGAADDGQPAKVSHAAGVTSLIAVSLADDLRSALNLAQLQAAL
SNAKARVDADIGTVFPRITLNDDERAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWVK
PDGAPPDGKWLTSEAALAAHVEQIVREHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRVTEVLRRLLAEQVPIR
NLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGAARQLRVVLFEQNLQERIENAVMRTKQGNFLALSSAVKQ
DIGEQVRAIVQSAHASGAHGAARLAVMVALGARRYVKTILQPMLPDLPVLSYQEIEEDVQLHTVGWVKNPPDDGTVGAGA
DVRTPGVAQ
>Mature_728_residues
AEPKALPRDWQRMFSVGRGVSGHRRIGASPRADLFLAAFIVAVVALFILPLPQAALDGMISLNLAASVVLLTVSTYVPSA
VSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVIDAFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVGA
RFSLDAMPGKQMSIDADLRAGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHGM
DIGTALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAHPRALLIAALVLAGFLVVPGFP
KWSFALIAVALGAFALTQLKRKTTAPSFNLIHVAGRVGAADDGQPAKVSHAAGVTSLIAVSLADDLRSALNLAQLQAALS
NAKARVDADIGTVFPRITLNDDERAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWVKP
DGAPPDGKWLTSEAALAAHVEQIVREHADELLGIQETQALVHLVRRDHPELVGELTRLVPLQRVTEVLRRLLAEQVPIRN
LRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHAGAARQLRVVLFEQNLQERIENAVMRTKQGNFLALSSAVKQD
IGEQVRAIVQSAHASGAHGAARLAVMVALGARRYVKTILQPMLPDLPVLSYQEIEEDVQLHTVGWVKNPPDDGTVGAGAD
VRTPGVAQ

Specific function: Could be involved in the secretion of the yop virulence proteins [H]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family [H]

Homologues:

Organism=Escherichia coli, GI1788187, Length=688, Percent_Identity=34.8837209302326, Blast_Score=340, Evalue=2e-94,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001712
- InterPro:   IPR006302 [H]

Pfam domain/function: PF00771 FHIPEP [H]

EC number: NA

Molecular weight: Translated: 78035; Mature: 77904

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPKALPRDWQRMFSVGRGVSGHRRIGASPRADLFLAAFIVAVVALFILPLPQAALDGM
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCH
ISLNLAASVVLLTVSTYVPSAVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVID
HHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHH
AFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVGARFSLDAMPGKQMSIDADLR
HHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCEEECCHHH
AGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
MDIGTALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAH
CHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRALLIAALVLAGFLVVPGFPKWSFALIAVALGAFALTQLKRKTTAPSFNLIHVAGRVGA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
ADDGQPAKVSHAAGVTSLIAVSLADDLRSALNLAQLQAALSNAKARVDADIGTVFPRITL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCEEEE
NDDERAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWVK
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCHHHHCCHHEEEEEC
PDGAPPDGKWLTSEAALAAHVEQIVREHADELLGIQETQALVHLVRRDHPELVGELTRLV
CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH
PLQRVTEVLRRLLAEQVPIRNLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GAARQLRVVLFEQNLQERIENAVMRTKQGNFLALSSAVKQDIGEQVRAIVQSAHASGAHG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AARLAVMVALGARRYVKTILQPMLPDLPVLSYQEIEEDVQLHTVGWVKNPPDDGTVGAGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHEEEEECCCCCCCCCCCCCCC
DVRTPGVAQ
CCCCCCCCC
>Mature Secondary Structure 
AEPKALPRDWQRMFSVGRGVSGHRRIGASPRADLFLAAFIVAVVALFILPLPQAALDGM
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCH
ISLNLAASVVLLTVSTYVPSAVSFSSFPALLLFTTLFRLALNIASCKLILLHANAGHVID
HHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHCEEEEEEECCCCHHHH
AFGRLVVGNNVVVGGVVFLVIAVVQFIVIAKGSERVAEVGARFSLDAMPGKQMSIDADLR
HHCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCEEECCHHH
AGIISADEARERREKLEQESQMHGAMDGAMKFVKGDAIAGLVIAFINIVAGIAVGTLMHG
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
MDIGTALQRYAILTVGDGMASQIPSLLVSIAAGIVTTRVATRDARQRQLGEQLGEQLGAH
CHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRALLIAALVLAGFLVVPGFPKWSFALIAVALGAFALTQLKRKTTAPSFNLIHVAGRVGA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
ADDGQPAKVSHAAGVTSLIAVSLADDLRSALNLAQLQAALSNAKARVDADIGTVFPRITL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHCCEEEE
NDDERAPAGTYRIYLQDVLAAHGALKPGWLLWDGVAPLPERAERQPAEAFGPFATALWVK
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHCCCHHHHCCHHEEEEEC
PDGAPPDGKWLTSEAALAAHVEQIVREHADELLGIQETQALVHLVRRDHPELVGELTRLV
CCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHH
PLQRVTEVLRRLLAEQVPIRNLRVIFESLITWAPNEPDDVIALVELVRVDLRRMITDRHA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GAARQLRVVLFEQNLQERIENAVMRTKQGNFLALSSAVKQDIGEQVRAIVQSAHASGAHG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCH
AARLAVMVALGARRYVKTILQPMLPDLPVLSYQEIEEDVQLHTVGWVKNPPDDGTVGAGA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHEEEEECCCCCCCCCCCCCCC
DVRTPGVAQ
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11402007 [H]