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The map label for this gene is yscJ [H]

Identifier: 189353528

GI number: 189353528

Start: 1764412

End: 1765293

Strand: Reverse

Name: yscJ [H]

Synonym: BMULJ_04772

Alternate gene names: 189353528

Gene position: 1765293-1764412 (Counterclockwise)

Preceding gene: 189353529

Following gene: 189353527

Centisome position: 71.38

GC content: 71.43

Gene sequence:

>882_bases
ATGACGACGATCGATTCGACGCCGCGCGCAGGCGCGTGGCGCAGCCGGGCGGCGCGTGCGCTGCTCGCGGGCGCGCTCGC
GCTGCTGGCCGGCTGCCAGAAGGAGCTGTATTCGGGCTTGTCCGAGCACGATGCGAACCAGATGATCGCGGTGCTCGGCG
ACGCGGGCATCAGCGCGTCGAAGGACAACGACGCGCGCGATGCGTCGGACCGCAACGCGTGGCAGGTCAGCGTCGCGGAC
GGCGACATGCAGTCGGCGCTGACCGTGCTGCAGGCGAACGGGCTGCCGAAGCCGAGCTACGCGAGCCTCGGCGAGCTGTT
CCAGAAACAGGGGCTCGTGTCGACGCCGGCCGAGGAGCGCGTGCGCTATCTGTACGGCGTGTCGCAGGATCTGTCGCGCA
CGCTGCAGGACATCGAAGGCGTGATCGTCGCGCGCGTGCAGGTCGTGATCCCCGAGAACGACCCGCTCGCGGACAAGATC
AAGCCGTCGTCGGCGGCCGTGTATATCCGCTACCGGCCGGGCGTCGATCTGCGCGCGATGGCGCCGATGGTTAAGGATCT
CGTCGCGCACAGCATCGAAGGGCTGCAGTACGACAACGTGTCGCTGTTCCTGCAGCCGGCCGCCGCGCGCGCCCCGCGCG
TCGACGGGATCGGCAGCGCGGTGTCCGACATCGTGCGGCTGCGCTCGCCGCTCGGCTGGCTCGTGTTCGCGCTGATCCTG
CTGACCTGCGCGGTGATCGCGCTGTCGGCGGCACGGCGCGGGATGTTCGGCGCGCGGCTCGCGGCGCTGCTCGGTGCGCA
GCGCGGCGGCAACGGCGCATCGAACGCATCGCCCGACGCAGGCGCGCTGCGCACGCCGGACGGCGCACGCGACGGCGCAT
GA

Upstream 100 bases:

>100_bases
GGCGGCGAATGGCTTCACGCACACGGTGCTGAAGACGCAGGAGTGACGAACGCGCGCGTCGGGCCGTCACGGGCCGCGCG
CGCGACGAAGCGGACCAACG

Downstream 100 bases:

>100_bases
ACGACGGCACATGAACGACGGCACATGAACGACGCACGCGTGCCGCCGCCCGACGCGGCCGATCCGCTGCCGTGGCTGCA
GCCGCTCGCGCCGCCGCCGG

Product: type III secretion protein SctJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTTIDSTPRAGAWRSRAARALLAGALALLAGCQKELYSGLSEHDANQMIAVLGDAGISASKDNDARDASDRNAWQVSVAD
GDMQSALTVLQANGLPKPSYASLGELFQKQGLVSTPAEERVRYLYGVSQDLSRTLQDIEGVIVARVQVVIPENDPLADKI
KPSSAAVYIRYRPGVDLRAMAPMVKDLVAHSIEGLQYDNVSLFLQPAAARAPRVDGIGSAVSDIVRLRSPLGWLVFALIL
LTCAVIALSAARRGMFGARLAALLGAQRGGNGASNASPDAGALRTPDGARDGA

Sequences:

>Translated_293_residues
MTTIDSTPRAGAWRSRAARALLAGALALLAGCQKELYSGLSEHDANQMIAVLGDAGISASKDNDARDASDRNAWQVSVAD
GDMQSALTVLQANGLPKPSYASLGELFQKQGLVSTPAEERVRYLYGVSQDLSRTLQDIEGVIVARVQVVIPENDPLADKI
KPSSAAVYIRYRPGVDLRAMAPMVKDLVAHSIEGLQYDNVSLFLQPAAARAPRVDGIGSAVSDIVRLRSPLGWLVFALIL
LTCAVIALSAARRGMFGARLAALLGAQRGGNGASNASPDAGALRTPDGARDGA
>Mature_292_residues
TTIDSTPRAGAWRSRAARALLAGALALLAGCQKELYSGLSEHDANQMIAVLGDAGISASKDNDARDASDRNAWQVSVADG
DMQSALTVLQANGLPKPSYASLGELFQKQGLVSTPAEERVRYLYGVSQDLSRTLQDIEGVIVARVQVVIPENDPLADKIK
PSSAAVYIRYRPGVDLRAMAPMVKDLVAHSIEGLQYDNVSLFLQPAAARAPRVDGIGSAVSDIVRLRSPLGWLVFALILL
TCAVIALSAARRGMFGARLAALLGAQRGGNGASNASPDAGALRTPDGARDGA

Specific function: Necessary for both basic pathogenicity and the induction of the hypersensitive response in resistant plants. Could be a part of a specific transport apparatus or a secretion apparatus that is required for pathogenicity. Hrp proteins may form a complex (tu

COG id: COG4669

COG function: function code U; Type III secretory pathway, lipoprotein EscJ

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yscJ lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003282
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF [H]

EC number: NA

Molecular weight: Translated: 30746; Mature: 30615

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTIDSTPRAGAWRSRAARALLAGALALLAGCQKELYSGLSEHDANQMIAVLGDAGISAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEHEEECCCCCCC
KDNDARDASDRNAWQVSVADGDMQSALTVLQANGLPKPSYASLGELFQKQGLVSTPAEER
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH
VRYLYGVSQDLSRTLQDIEGVIVARVQVVIPENDPLADKIKPSSAAVYIRYRPGVDLRAM
HHHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHCCCCCEEEEEEECCCCCHHHH
APMVKDLVAHSIEGLQYDNVSLFLQPAAARAPRVDGIGSAVSDIVRLRSPLGWLVFALIL
HHHHHHHHHHHHCCCCCCCEEEEEECHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LTCAVIALSAARRGMFGARLAALLGAQRGGNGASNASPDAGALRTPDGARDGA
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTIDSTPRAGAWRSRAARALLAGALALLAGCQKELYSGLSEHDANQMIAVLGDAGISAS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHEEHEEECCCCCCC
KDNDARDASDRNAWQVSVADGDMQSALTVLQANGLPKPSYASLGELFQKQGLVSTPAEER
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHH
VRYLYGVSQDLSRTLQDIEGVIVARVQVVIPENDPLADKIKPSSAAVYIRYRPGVDLRAM
HHHHHCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHCCCCCEEEEEEECCCCCHHHH
APMVKDLVAHSIEGLQYDNVSLFLQPAAARAPRVDGIGSAVSDIVRLRSPLGWLVFALIL
HHHHHHHHHHHHCCCCCCCEEEEEECHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LTCAVIALSAARRGMFGARLAALLGAQRGGNGASNASPDAGALRTPDGARDGA
HHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1472717 [H]