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The map label for this gene is ybiX [C]

Identifier: 189353481

GI number: 189353481

Start: 1700289

End: 1700972

Strand: Direct

Name: ybiX [C]

Synonym: BMULJ_04725

Alternate gene names: 189353481

Gene position: 1700289-1700972 (Clockwise)

Preceding gene: 189353480

Following gene: 189353482

Centisome position: 68.75

GC content: 65.5

Gene sequence:

>684_bases
ATGATGCTGCACGTTCCCGGCGTGCTGACCCAGGCGCAGGTTGCACGCTGTCGAGAGATGCTCGATGCGGCCGAATGGAT
CGACGGCAATGCGACGTCGGGTGCGCAGTCCGCACTCGCGAAGCGCAATCGACAGTTGCCGGAAGGCTCGCCGGCCGCGC
GCGCGGTCGGCGACGCGATTCAGGACGCGCTCGCGCGCCATCCGCTGTTCTTTTCCGCTGCGCTGCCGCTGAAGGTATTT
CCGCCGCTGTTCAATCGCTATGCGGGCGGCGAGACGTTCGGCACGCATGTCGACAACGCGATCCGGCTGTTGCGCGGCAC
CGACTTCCGCGTGCGCAGCGATCTGTCGGCGACGCTGTTTCTCGCCGAGCCCGACACGTACGACGGCGGCGAGCTCTGCG
TGGAGGATACCTACGGCGTGCATCGCGCGAAGCTGCCGGCCGGCGACCTCGTGCTGTATCCGGCATCGAGCCTGCATCAC
GTGACACCCGTGACGCGCGGCGAGCGCGTCGCCTCGTTCTTCTGGATTCAGAGCATGGTGCGCGACGACGGCGACCGCAC
GCTGCTGTTCCAGCTCGACACGCAGATTCAGACGCTGACGGCAGAGAAAGGGGCGAAGGATCCGGTGGTGATTTCGTTGA
CGGGGATTTATCACAACCTGTTGAGGAAGTGGGCGGATGCGTGA

Upstream 100 bases:

>100_bases
CGTTCGTCGCGAAGATGCGCGCGTATCTCGCGTCGTCGCCGCTCGACGCATTCCGCACGGCAGCCATGCAGCTGCCGTCG
CACGACATGGAGTCCGCCAC

Downstream 100 bases:

>100_bases
CGGGATGAAGCCGGCAGCTTTGTAGCGCTCGAATTCACCTCCCTGCCAGAACCCGGCGTAGGTTTTGCGTGAGCAGGACA
TCGCCAATATCTTCGCGGTT

Product: putative hydroxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MMLHVPGVLTQAQVARCREMLDAAEWIDGNATSGAQSALAKRNRQLPEGSPAARAVGDAIQDALARHPLFFSAALPLKVF
PPLFNRYAGGETFGTHVDNAIRLLRGTDFRVRSDLSATLFLAEPDTYDGGELCVEDTYGVHRAKLPAGDLVLYPASSLHH
VTPVTRGERVASFFWIQSMVRDDGDRTLLFQLDTQIQTLTAEKGAKDPVVISLTGIYHNLLRKWADA

Sequences:

>Translated_227_residues
MMLHVPGVLTQAQVARCREMLDAAEWIDGNATSGAQSALAKRNRQLPEGSPAARAVGDAIQDALARHPLFFSAALPLKVF
PPLFNRYAGGETFGTHVDNAIRLLRGTDFRVRSDLSATLFLAEPDTYDGGELCVEDTYGVHRAKLPAGDLVLYPASSLHH
VTPVTRGERVASFFWIQSMVRDDGDRTLLFQLDTQIQTLTAEKGAKDPVVISLTGIYHNLLRKWADA
>Mature_227_residues
MMLHVPGVLTQAQVARCREMLDAAEWIDGNATSGAQSALAKRNRQLPEGSPAARAVGDAIQDALARHPLFFSAALPLKVF
PPLFNRYAGGETFGTHVDNAIRLLRGTDFRVRSDLSATLFLAEPDTYDGGELCVEDTYGVHRAKLPAGDLVLYPASSLHH
VTPVTRGERVASFFWIQSMVRDDGDRTLLFQLDTQIQTLTAEKGAKDPVVISLTGIYHNLLRKWADA

Specific function: Unknown

COG id: COG3128

COG function: function code S; Uncharacterized iron-regulated protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe2OG dioxygenase domain [H]

Homologues:

Organism=Escherichia coli, GI87081784, Length=226, Percent_Identity=55.7522123893805, Blast_Score=261, Evalue=3e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005123
- InterPro:   IPR006620 [H]

Pfam domain/function: PF03171 2OG-FeII_Oxy [H]

EC number: 1.14.11.- [C]

Molecular weight: Translated: 24856; Mature: 24856

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLHVPGVLTQAQVARCREMLDAAEWIDGNATSGAQSALAKRNRQLPEGSPAARAVGDAI
CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
QDALARHPLFFSAALPLKVFPPLFNRYAGGETFGTHVDNAIRLLRGTDFRVRSDLSATLF
HHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEE
LAEPDTYDGGELCVEDTYGVHRAKLPAGDLVLYPASSLHHVTPVTRGERVASFFWIQSMV
EECCCCCCCCCEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
RDDGDRTLLFQLDTQIQTLTAEKGAKDPVVISLTGIYHNLLRKWADA
HCCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MMLHVPGVLTQAQVARCREMLDAAEWIDGNATSGAQSALAKRNRQLPEGSPAARAVGDAI
CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
QDALARHPLFFSAALPLKVFPPLFNRYAGGETFGTHVDNAIRLLRGTDFRVRSDLSATLF
HHHHHHCCEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCEEEE
LAEPDTYDGGELCVEDTYGVHRAKLPAGDLVLYPASSLHHVTPVTRGERVASFFWIQSMV
EECCCCCCCCCEEEECCCCCEEECCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
RDDGDRTLLFQLDTQIQTLTAEKGAKDPVVISLTGIYHNLLRKWADA
HCCCCEEEEEEECCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA