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The map label for this gene is ypfJ [H]

Identifier: 189353457

GI number: 189353457

Start: 1675854

End: 1676729

Strand: Reverse

Name: ypfJ [H]

Synonym: BMULJ_04701

Alternate gene names: 189353457

Gene position: 1676729-1675854 (Counterclockwise)

Preceding gene: 189353463

Following gene: 189353456

Centisome position: 67.8

GC content: 68.15

Gene sequence:

>876_bases
ATGAGGCTGGACGACGAAAGAGAGAGCATGAACGTCGAGGATCGCCGTGGTGCGGGCGGCTTCGGTGGCGGACGGGGCGC
GACGATCGGTATCGGCACGATCGTGGTCGCGCTGGCCGCGTCGTATTTCTTCGGGATCGACCCGCGCGTCGTGCTCGAGG
GCGCGTCGATGCTGCAGGGTCAGCAGACGCAGCAGGCGCCGGCGCAGCGCCAGGGTGCGCCGGCGACCGACCCCGGCGCG
GTCTTCACGCGCAAGGTGCTCGGCAACATCGAGCGGACCTGGACGACGATCTTCTCGACGCAGCTGCACGCGCAATACCA
GCCGCCGAAGCTCGTGATGTTCACGAATTCGACGCCGACCGCATGCGGGACGGGCCAGACCGCGATGGGGCCGTTCTATT
GCCCGGGCGACCAAAAGGTCTATATCGATCTCGGCTTCTACGACGAGCTGCGCAAGCGGTTCGGCGCCGGCGGCGATTTC
GCGCAGGCGTACGTGATCGCGCACGAGGTCGGCCATCACGTGCAGAACCTGCTCGGCATTTCCGAGAAGGTCGACGCCGC
GCGCCGGCGCGCGAGCGAGGCGCGCTCGAATGCGCTGTCGGTGCGCATGGAGCTGCAGGCCGACTGTTTCGCGGGCGTCT
GGGCGAACAACGCGCAGCGCGCAAACCAGCGGCTGATCGAGCCCGGCGACTTCGAGCAGGGGCTGAAGACGGCGGCCGCC
ATCGGCGACGATCGGCTGCAGCAGCAGGGACAGGGTTATGTGGTGCCGGAAAGCTTCACGCACGGCACGAGCGAGCAGCG
CATGTACTGGCTGCGGCGCGGGATGGAGTCGGGCGAGCTGAGCGCCTGCGATACGTTCGCCGCGAACGCGCACTGA

Upstream 100 bases:

>100_bases
TCGAATTTTTTGAGACAGTCGACGAAAGCCCGGCAAAATAGCGCGGACGGGCCGCGCATCGGTGCGACGGCCGGATCGAC
AAGAACGGGAGGGGCCGGCA

Downstream 100 bases:

>100_bases
CGGACTGAGATCTACTGACTTGCCGCCCGGCGCCCGCCGCGTGGCGGGCGACGAGGCAACGAGGCAACGAGGCAACGAGG
CAACGAGGCAACGGCACGGC

Product: predicted metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MRLDDERESMNVEDRRGAGGFGGGRGATIGIGTIVVALAASYFFGIDPRVVLEGASMLQGQQTQQAPAQRQGAPATDPGA
VFTRKVLGNIERTWTTIFSTQLHAQYQPPKLVMFTNSTPTACGTGQTAMGPFYCPGDQKVYIDLGFYDELRKRFGAGGDF
AQAYVIAHEVGHHVQNLLGISEKVDAARRRASEARSNALSVRMELQADCFAGVWANNAQRANQRLIEPGDFEQGLKTAAA
IGDDRLQQQGQGYVVPESFTHGTSEQRMYWLRRGMESGELSACDTFAANAH

Sequences:

>Translated_291_residues
MRLDDERESMNVEDRRGAGGFGGGRGATIGIGTIVVALAASYFFGIDPRVVLEGASMLQGQQTQQAPAQRQGAPATDPGA
VFTRKVLGNIERTWTTIFSTQLHAQYQPPKLVMFTNSTPTACGTGQTAMGPFYCPGDQKVYIDLGFYDELRKRFGAGGDF
AQAYVIAHEVGHHVQNLLGISEKVDAARRRASEARSNALSVRMELQADCFAGVWANNAQRANQRLIEPGDFEQGLKTAAA
IGDDRLQQQGQGYVVPESFTHGTSEQRMYWLRRGMESGELSACDTFAANAH
>Mature_291_residues
MRLDDERESMNVEDRRGAGGFGGGRGATIGIGTIVVALAASYFFGIDPRVVLEGASMLQGQQTQQAPAQRQGAPATDPGA
VFTRKVLGNIERTWTTIFSTQLHAQYQPPKLVMFTNSTPTACGTGQTAMGPFYCPGDQKVYIDLGFYDELRKRFGAGGDF
AQAYVIAHEVGHHVQNLLGISEKVDAARRRASEARSNALSVRMELQADCFAGVWANNAQRANQRLIEPGDFEQGLKTAAA
IGDDRLQQQGQGYVVPESFTHGTSEQRMYWLRRGMESGELSACDTFAANAH

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=299, Percent_Identity=50.1672240802676, Blast_Score=276, Evalue=1e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31614; Mature: 31614

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDDERESMNVEDRRGAGGFGGGRGATIGIGTIVVALAASYFFGIDPRVVLEGASMLQG
CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC
QQTQQAPAQRQGAPATDPGAVFTRKVLGNIERTWTTIFSTQLHAQYQPPKLVMFTNSTPT
CCHHHCCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
ACGTGQTAMGPFYCPGDQKVYIDLGFYDELRKRFGAGGDFAQAYVIAHEVGHHVQNLLGI
CCCCCCCCCCCEECCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SEKVDAARRRASEARSNALSVRMELQADCFAGVWANNAQRANQRLIEPGDFEQGLKTAAA
HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH
IGDDRLQQQGQGYVVPESFTHGTSEQRMYWLRRGMESGELSACDTFAANAH
HCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MRLDDERESMNVEDRRGAGGFGGGRGATIGIGTIVVALAASYFFGIDPRVVLEGASMLQG
CCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHHCC
QQTQQAPAQRQGAPATDPGAVFTRKVLGNIERTWTTIFSTQLHAQYQPPKLVMFTNSTPT
CCHHHCCHHHCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
ACGTGQTAMGPFYCPGDQKVYIDLGFYDELRKRFGAGGDFAQAYVIAHEVGHHVQNLLGI
CCCCCCCCCCCEECCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SEKVDAARRRASEARSNALSVRMELQADCFAGVWANNAQRANQRLIEPGDFEQGLKTAAA
HHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH
IGDDRLQQQGQGYVVPESFTHGTSEQRMYWLRRGMESGELSACDTFAANAH
HCHHHHHHCCCCEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]