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The map label for this gene is ynfM [H]

Identifier: 189353367

GI number: 189353367

Start: 1616527

End: 1617864

Strand: Direct

Name: ynfM [H]

Synonym: BMULJ_04607

Alternate gene names: 189353367

Gene position: 1616527-1617864 (Clockwise)

Preceding gene: 189353365

Following gene: 189353368

Centisome position: 65.36

GC content: 67.71

Gene sequence:

>1338_bases
ATGGTTGCGGTTCTTTTCATATATTGGACATATGTGCCGCTGCGCGCAAGAATACTCGCATTCCCCGCTACATCGAACCT
GTCCATGTCTTCCTCGACGATTGCGTCGTCTGCGCACGGCGCGTCGAAAGCCGCGCCCGACGCGCTTCCCGCCGGCGTGT
CGCCACGCTCGGCCGCCTACAAGCGCATCGCGTTCGCGCTGTTTCTCGCCGGCTTCTCCACGTTTTCGCTGCTGTACTGC
GTACAGCCGCTGCTCCCCGCATTCGCGCGCGAATTCGGTCTCGGCGCGGCGTCCAGCTCGCTCTCGCTGTCGCTGTCGAC
TGGCGCGCTCGCGGTGTCGATCCTCTGCGCGGGCGCGTTGTCCGAGCGGTTCGGCCGCCGCGGGCTGATGTTCGCGTCGA
TGACGCTCGCAGCCGCGTTCAACCTGCTCGCGGCGCTCGCGCCCGACTGGGAGCTGCTGCTCGTGTGGCGCGCACTCGAA
GGGTTCGCGCTCGGCGGCGTGCCGGCCGTCGCGATGGCCTATCTTGCCGAGGAAATCGCGGCCGAAGGGCTCGGTTTCTC
GATGGGTCTGTACGTCGGCGGTACGGCGTTCGGCGGCATGATCGGACGAATCGGGATGAGCGCGCTCGAGGAATATTTTT
CGTGGCGCACCGCGATGCTGACGATCGGCATCGTCGACCTGATCGCCGCGGTCGCGTTCGTGCTGCTGCTGCCGCCCTCG
CGGCGCTTCGTGAAGCGCACCGACCTGACGCTGCGCCATCATTTGCGGCTCTGGCATGCGCAGCTGCGCCACGCGCGACT
GCCGTTCGTGTTCGCGATCGGCTTTCTCGTGATGGGCGCGTTCGTGACCGTGTACAACTACGCCGGCTTCCGGCTGATCG
CCGCGCCGTTCAACCTTCGTCCGGCCGTATGCGGGCTGATTTTCGGCGCGTATCTGTTCGGGATGGTGTCGTCGTCGACG
GCCGGCGCGCTCGCCGACCGCCTCGGCCGCGCACCGGTGCTGACGAGCGGCATTCTCGTGTTTGCCGCGGGCCTCGCGCT
GACGCTCTCGCATTCGCTCGTCGCGATCGTCGTCGGGATCGTGCTCGTCACGATCGGCTTTTTCGTCGCGCATTCGGTCG
CGAGCGGCTGGGTCGGCTATCTCGCCGGTCCGGCAAAGGGGCACGCGGCGTCGCTGTACCTGCTCGCCTACTACGTCGGC
TCGAGCGTGCTCGGCTCGCTCGGCGGCACGTTCTGGCAACGCGGCGCGTGGACGAGCGTCGCCGCTTATGTCGCGGTGCT
GCTCGGGCTCGCGTTGCTGGCCGCACGGCGCCTCACGCGCGCGGATGGCGTGCGGTGA

Upstream 100 bases:

>100_bases
CCACGGCCAGAAAATAACGGAGATGCCGAAGTTCCATGCGTTGCGTCCTGCGTCCGTGGCGGAGATACCGGTGGGCACGC
CGCAGCCAGTGGAAAAACAT

Downstream 100 bases:

>100_bases
TCATGCGCGGTGAGTGACGCCTACTAGCGCCGCGCCGGAAAACGGGATCGTATCGGGGCGTTCCGACCCTCACGGCGCGC
GGCCTATCAACCCCATTGAG

Product: putative membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MVAVLFIYWTYVPLRARILAFPATSNLSMSSSTIASSAHGASKAAPDALPAGVSPRSAAYKRIAFALFLAGFSTFSLLYC
VQPLLPAFAREFGLGAASSSLSLSLSTGALAVSILCAGALSERFGRRGLMFASMTLAAAFNLLAALAPDWELLLVWRALE
GFALGGVPAVAMAYLAEEIAAEGLGFSMGLYVGGTAFGGMIGRIGMSALEEYFSWRTAMLTIGIVDLIAAVAFVLLLPPS
RRFVKRTDLTLRHHLRLWHAQLRHARLPFVFAIGFLVMGAFVTVYNYAGFRLIAAPFNLRPAVCGLIFGAYLFGMVSSST
AGALADRLGRAPVLTSGILVFAAGLALTLSHSLVAIVVGIVLVTIGFFVAHSVASGWVGYLAGPAKGHAASLYLLAYYVG
SSVLGSLGGTFWQRGAWTSVAAYVAVLLGLALLAARRLTRADGVR

Sequences:

>Translated_445_residues
MVAVLFIYWTYVPLRARILAFPATSNLSMSSSTIASSAHGASKAAPDALPAGVSPRSAAYKRIAFALFLAGFSTFSLLYC
VQPLLPAFAREFGLGAASSSLSLSLSTGALAVSILCAGALSERFGRRGLMFASMTLAAAFNLLAALAPDWELLLVWRALE
GFALGGVPAVAMAYLAEEIAAEGLGFSMGLYVGGTAFGGMIGRIGMSALEEYFSWRTAMLTIGIVDLIAAVAFVLLLPPS
RRFVKRTDLTLRHHLRLWHAQLRHARLPFVFAIGFLVMGAFVTVYNYAGFRLIAAPFNLRPAVCGLIFGAYLFGMVSSST
AGALADRLGRAPVLTSGILVFAAGLALTLSHSLVAIVVGIVLVTIGFFVAHSVASGWVGYLAGPAKGHAASLYLLAYYVG
SSVLGSLGGTFWQRGAWTSVAAYVAVLLGLALLAARRLTRADGVR
>Mature_445_residues
MVAVLFIYWTYVPLRARILAFPATSNLSMSSSTIASSAHGASKAAPDALPAGVSPRSAAYKRIAFALFLAGFSTFSLLYC
VQPLLPAFAREFGLGAASSSLSLSLSTGALAVSILCAGALSERFGRRGLMFASMTLAAAFNLLAALAPDWELLLVWRALE
GFALGGVPAVAMAYLAEEIAAEGLGFSMGLYVGGTAFGGMIGRIGMSALEEYFSWRTAMLTIGIVDLIAAVAFVLLLPPS
RRFVKRTDLTLRHHLRLWHAQLRHARLPFVFAIGFLVMGAFVTVYNYAGFRLIAAPFNLRPAVCGLIFGAYLFGMVSSST
AGALADRLGRAPVLTSGILVFAAGLALTLSHSLVAIVVGIVLVTIGFFVAHSVASGWVGYLAGPAKGHAASLYLLAYYVG
SSVLGSLGGTFWQRGAWTSVAAYVAVLLGLALLAARRLTRADGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=408, Percent_Identity=44.3627450980392, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46735; Mature: 46735

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVLFIYWTYVPLRARILAFPATSNLSMSSSTIASSAHGASKAAPDALPAGVSPRSAAY
CEEEEEHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
KRIAFALFLAGFSTFSLLYCVQPLLPAFAREFGLGAASSSLSLSLSTGALAVSILCAGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHH
SERFGRRGLMFASMTLAAAFNLLAALAPDWELLLVWRALEGFALGGVPAVAMAYLAEEIA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AEGLGFSMGLYVGGTAFGGMIGRIGMSALEEYFSWRTAMLTIGIVDLIAAVAFVLLLPPS
HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RRFVKRTDLTLRHHLRLWHAQLRHARLPFVFAIGFLVMGAFVTVYNYAGFRLIAAPFNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PAVCGLIFGAYLFGMVSSSTAGALADRLGRAPVLTSGILVFAAGLALTLSHSLVAIVVGI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVTIGFFVAHSVASGWVGYLAGPAKGHAASLYLLAYYVGSSVLGSLGGTFWQRGAWTSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAYVAVLLGLALLAARRLTRADGVR
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVAVLFIYWTYVPLRARILAFPATSNLSMSSSTIASSAHGASKAAPDALPAGVSPRSAAY
CEEEEEHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
KRIAFALFLAGFSTFSLLYCVQPLLPAFAREFGLGAASSSLSLSLSTGALAVSILCAGAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHH
SERFGRRGLMFASMTLAAAFNLLAALAPDWELLLVWRALEGFALGGVPAVAMAYLAEEIA
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
AEGLGFSMGLYVGGTAFGGMIGRIGMSALEEYFSWRTAMLTIGIVDLIAAVAFVLLLPPS
HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RRFVKRTDLTLRHHLRLWHAQLRHARLPFVFAIGFLVMGAFVTVYNYAGFRLIAAPFNLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
PAVCGLIFGAYLFGMVSSSTAGALADRLGRAPVLTSGILVFAAGLALTLSHSLVAIVVGI
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLVTIGFFVAHSVASGWVGYLAGPAKGHAASLYLLAYYVGSSVLGSLGGTFWQRGAWTSV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAYVAVLLGLALLAARRLTRADGVR
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]