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The map label for this gene is mocR [H]

Identifier: 189353316

GI number: 189353316

Start: 1553478

End: 1554908

Strand: Direct

Name: mocR [H]

Synonym: BMULJ_04556

Alternate gene names: 189353316

Gene position: 1553478-1554908 (Clockwise)

Preceding gene: 189353314

Following gene: 189353318

Centisome position: 62.81

GC content: 69.11

Gene sequence:

>1431_bases
ATGGACTGTCCACATGTCGAATCGCCTCGGGAAGACGATGCGCCGATCTACCTGCAGCTCTATCGCCGCTACCGCGACGC
GATAACGGACGGCAAGCTGCGCCCGGGCGACCGGGTGCCGTCCGTGCGCAGCCTCGCGAGCGAACTGAACCTTGCGCGCG
GTACGGTGGAGGCGGCCTACCAGATGCTGTCGAGCGAAGGATATTTCGTGACGCACGGTGCGGCAGGTACGCGAGTCGCG
CCGGCTCTCGCGAATCCGGCCCGGACGGTCGCCCGCCACGCGGCGATACGCGTCGTTCGCGAATCGCTGCAGGCGCCGAC
CGTCGCGAGCAATGTGCGGCCATTCCAGCTCGGCGTGCCCGCGCTCGACGCGTTCCCGCGGAAGACGTGGGCGCGTATCG
CGGGACGCAACCTGCGCACGCTCGACGCGGCCGCGATGACGTCGCCCGATCCGGCCGGCTACGTGCCGCTGCGGCGCGCC
ATCGCGGCATATCTGCAGATCTCGCGCGGCGTCGCATGCGCGTACGAGCAGGTATTCGTGACGGCCGGTTATCGCGGTGC
ACTCGAACTCGTGCGCCGCGCCCTACTGCATGCCGGCGATCTCGGGTGGTACGAGGATCCGGGATACGCGCTCGGCCGGC
ACTATCTGGAACTCGCGGACCTGCGACTCGCACCGGCACCGGTGGACGACGAAGGGATCGACGTCGCGGCAGCGCTGCAG
CGCGCGCCGCAGGCGCGCTTTGCGGTGGTCACGCCGGGCCGCCAAAGCCCGACCGGTGTCGCGCTGTCGCCGACACGCAG
ACTGGAACTGCTGGAATGGGCGACGCGCCGGCGCGCATGGATCGTCGAGGACGATTACGACAGCGAGTTTCACTACCACG
GCCGCCCTTTGCCGGCGCTGCAGAATCTCGATCGCGATGGACGCGTGCTTTACACCGGCACGTTCAGCAAGGTGCTGTTG
CCCGGACTGCGGCTCGCCTATCTGGTCGTTCCGCAGGCGCTGGTCGGCCGCTTCGCGCACGTGGCCGGCCGTCTTCCGGG
CCCCGGCTCGATCCTGCCGCAGGCCACCGTCGCCGCTTTCATGGAGCAAGGGCACTTCGCTCGCCACTTGCGCAAGATGC
GCGCGCTGTATGCGGAGCGGCGGGCGTTTCTGGTCGATGCGCTCGCCCGGACGCTCGGCGAACATCTGCACATCCGGCCG
CAGGCAGGCGGCGTACACGTACTCGCATATCTGAGCGACCGGCACGACGACAAGCGCGTCGCGGCGGCCGCCGCAGCCGA
CGGGCTTGGCGTGCAGGCATTGAGCGACTGGCGGATGCGCGCGTCGGCGCAAGGCGGACTGCTGATGGGGTTTGCGAACT
TCGCAACGGCGGAAGACGCGCGCGCCGCCGTACGGCGCCTGTCGGCGCATTTTGCACAAGGAAAAGGCTGA

Upstream 100 bases:

>100_bases
AAGGCGTCATCGGTGTTCCTCGTCGTCCGGCGATCAATTTACAAAACCGATGATCTGCCCGACAGGGACAAGACCGGACC
GATTGAATGGGACATGATCG

Downstream 100 bases:

>100_bases
CGCGCGTGTGGACTGCGGGCGTGGTCGGCCGCGCAGCCGGCTGGCAAAGGGCTTGAGGAAGCCGCACATCGCCGGCTGTC
AGGCGAGCGCGGGCGTTCTG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MDCPHVESPREDDAPIYLQLYRRYRDAITDGKLRPGDRVPSVRSLASELNLARGTVEAAYQMLSSEGYFVTHGAAGTRVA
PALANPARTVARHAAIRVVRESLQAPTVASNVRPFQLGVPALDAFPRKTWARIAGRNLRTLDAAAMTSPDPAGYVPLRRA
IAAYLQISRGVACAYEQVFVTAGYRGALELVRRALLHAGDLGWYEDPGYALGRHYLELADLRLAPAPVDDEGIDVAAALQ
RAPQARFAVVTPGRQSPTGVALSPTRRLELLEWATRRRAWIVEDDYDSEFHYHGRPLPALQNLDRDGRVLYTGTFSKVLL
PGLRLAYLVVPQALVGRFAHVAGRLPGPGSILPQATVAAFMEQGHFARHLRKMRALYAERRAFLVDALARTLGEHLHIRP
QAGGVHVLAYLSDRHDDKRVAAAAAADGLGVQALSDWRMRASAQGGLLMGFANFATAEDARAAVRRLSAHFAQGKG

Sequences:

>Translated_476_residues
MDCPHVESPREDDAPIYLQLYRRYRDAITDGKLRPGDRVPSVRSLASELNLARGTVEAAYQMLSSEGYFVTHGAAGTRVA
PALANPARTVARHAAIRVVRESLQAPTVASNVRPFQLGVPALDAFPRKTWARIAGRNLRTLDAAAMTSPDPAGYVPLRRA
IAAYLQISRGVACAYEQVFVTAGYRGALELVRRALLHAGDLGWYEDPGYALGRHYLELADLRLAPAPVDDEGIDVAAALQ
RAPQARFAVVTPGRQSPTGVALSPTRRLELLEWATRRRAWIVEDDYDSEFHYHGRPLPALQNLDRDGRVLYTGTFSKVLL
PGLRLAYLVVPQALVGRFAHVAGRLPGPGSILPQATVAAFMEQGHFARHLRKMRALYAERRAFLVDALARTLGEHLHIRP
QAGGVHVLAYLSDRHDDKRVAAAAAADGLGVQALSDWRMRASAQGGLLMGFANFATAEDARAAVRRLSAHFAQGKG
>Mature_476_residues
MDCPHVESPREDDAPIYLQLYRRYRDAITDGKLRPGDRVPSVRSLASELNLARGTVEAAYQMLSSEGYFVTHGAAGTRVA
PALANPARTVARHAAIRVVRESLQAPTVASNVRPFQLGVPALDAFPRKTWARIAGRNLRTLDAAAMTSPDPAGYVPLRRA
IAAYLQISRGVACAYEQVFVTAGYRGALELVRRALLHAGDLGWYEDPGYALGRHYLELADLRLAPAPVDDEGIDVAAALQ
RAPQARFAVVTPGRQSPTGVALSPTRRLELLEWATRRRAWIVEDDYDSEFHYHGRPLPALQNLDRDGRVLYTGTFSKVLL
PGLRLAYLVVPQALVGRFAHVAGRLPGPGSILPQATVAAFMEQGHFARHLRKMRALYAERRAFLVDALARTLGEHLHIRP
QAGGVHVLAYLSDRHDDKRVAAAAAADGLGVQALSDWRMRASAQGGLLMGFANFATAEDARAAVRRLSAHFAQGKG

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787710, Length=431, Percent_Identity=28.7703016241299, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1790797, Length=460, Percent_Identity=26.7391304347826, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 51926; Mature: 51926

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDCPHVESPREDDAPIYLQLYRRYRDAITDGKLRPGDRVPSVRSLASELNLARGTVEAAY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QMLSSEGYFVTHGAAGTRVAPALANPARTVARHAAIRVVRESLQAPTVASNVRPFQLGVP
HHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCC
ALDAFPRKTWARIAGRNLRTLDAAAMTSPDPAGYVPLRRAIAAYLQISRGVACAYEQVFV
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHE
TAGYRGALELVRRALLHAGDLGWYEDPGYALGRHYLELADLRLAPAPVDDEGIDVAAALQ
ECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCHHHHHHH
RAPQARFAVVTPGRQSPTGVALSPTRRLELLEWATRRRAWIVEDDYDSEFHYHGRPLPAL
HCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
QNLDRDGRVLYTGTFSKVLLPGLRLAYLVVPQALVGRFAHVAGRLPGPGSILPQATVAAF
HCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MEQGHFARHLRKMRALYAERRAFLVDALARTLGEHLHIRPQAGGVHVLAYLSDRHDDKRV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCHHHH
AAAAAADGLGVQALSDWRMRASAQGGLLMGFANFATAEDARAAVRRLSAHFAQGKG
HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDCPHVESPREDDAPIYLQLYRRYRDAITDGKLRPGDRVPSVRSLASELNLARGTVEAAY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QMLSSEGYFVTHGAAGTRVAPALANPARTVARHAAIRVVRESLQAPTVASNVRPFQLGVP
HHHCCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEECCC
ALDAFPRKTWARIAGRNLRTLDAAAMTSPDPAGYVPLRRAIAAYLQISRGVACAYEQVFV
HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHE
TAGYRGALELVRRALLHAGDLGWYEDPGYALGRHYLELADLRLAPAPVDDEGIDVAAALQ
ECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCEECCCCCCCCCCHHHHHHH
RAPQARFAVVTPGRQSPTGVALSPTRRLELLEWATRRRAWIVEDDYDSEFHYHGRPLPAL
HCCCCCEEEECCCCCCCCCEEECHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHH
QNLDRDGRVLYTGTFSKVLLPGLRLAYLVVPQALVGRFAHVAGRLPGPGSILPQATVAAF
HCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
MEQGHFARHLRKMRALYAERRAFLVDALARTLGEHLHIRPQAGGVHVLAYLSDRHDDKRV
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCHHHH
AAAAAADGLGVQALSDWRMRASAQGGLLMGFANFATAEDARAAVRRLSAHFAQGKG
HHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]