Click here to switch to the map view.

The map label for this gene is 189353196

Identifier: 189353196

GI number: 189353196

Start: 1422292

End: 1422735

Strand: Direct

Name: 189353196

Synonym: BMULJ_04432

Alternate gene names: NA

Gene position: 1422292-1422735 (Clockwise)

Preceding gene: 189353195

Following gene: 189353197

Centisome position: 57.51

GC content: 68.92

Gene sequence:

>444_bases
ATGAACGCCGCACGCAAACCGAAACTCACCGCCGATGCCGTCGCCACCGAGCTGACGCTCGCCGTCGGCCAACTGATCCG
TCGGCTGCGCTCCGAACTCGCGTCCGACGGGCTCGGCATGTCGCAGACGAGCGCGCTCGCGCGGCTCGAATCGAACGGCC
CGATGACGACCGCCGATCTCGCCCGCGCCGAGTCGATGAAGCCGCAATCGATGAAGGCGATCCTCGCGAGTCTCGAAGAG
GAAGGTCTCGTCGAACGCGAGCCGCATCCGACCGACGGTCGCCAGATCCTGTTCCTGCTGACCGCGGCCGGCCGCGAGGC
GCGCCGCAAGCGCAGCGCCGCCAAGCACCGCTGGCTCGGCGCCGCGATCGAGCAACTCGATCCCGAAGAAATCCGCACGC
TCGCCGCCGCGATCCCGCTGATCAGGCGGATCGGCGACAAGTGA

Upstream 100 bases:

>100_bases
GTCTGCCGCACGCCTTCGTCGCAACGCGCATCGCACTGCATCGTCGATAATTCGACAGTCAAACTTGCAAGTCTAACTGT
CTTGTCCTAAGATCCGCCTC

Downstream 100 bases:

>100_bases
CCTGCGCGCGCGGCGATGCCGCCGCATCCGTTCGCGCGCCTTACCCGTCCCCCGTCCGTTCCATGGAGTCCTCATCATGA
GCGCAACCCGTCTCGACACA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNAARKPKLTADAVATELTLAVGQLIRRLRSELASDGLGMSQTSALARLESNGPMTTADLARAESMKPQSMKAILASLEE
EGLVEREPHPTDGRQILFLLTAAGREARRKRSAAKHRWLGAAIEQLDPEEIRTLAAAIPLIRRIGDK

Sequences:

>Translated_147_residues
MNAARKPKLTADAVATELTLAVGQLIRRLRSELASDGLGMSQTSALARLESNGPMTTADLARAESMKPQSMKAILASLEE
EGLVEREPHPTDGRQILFLLTAAGREARRKRSAAKHRWLGAAIEQLDPEEIRTLAAAIPLIRRIGDK
>Mature_147_residues
MNAARKPKLTADAVATELTLAVGQLIRRLRSELASDGLGMSQTSALARLESNGPMTTADLARAESMKPQSMKAILASLEE
EGLVEREPHPTDGRQILFLLTAAGREARRKRSAAKHRWLGAAIEQLDPEEIRTLAAAIPLIRRIGDK

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 15975; Mature: 15975

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAARKPKLTADAVATELTLAVGQLIRRLRSELASDGLGMSQTSALARLESNGPMTTADL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
ARAESMKPQSMKAILASLEEEGLVEREPHPTDGRQILFLLTAAGREARRKRSAAKHRWLG
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHH
AAIEQLDPEEIRTLAAAIPLIRRIGDK
HHHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAARKPKLTADAVATELTLAVGQLIRRLRSELASDGLGMSQTSALARLESNGPMTTADL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHH
ARAESMKPQSMKAILASLEEEGLVEREPHPTDGRQILFLLTAAGREARRKRSAAKHRWLG
HHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHH
AAIEQLDPEEIRTLAAAIPLIRRIGDK
HHHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]