Click here to switch to the map view.

The map label for this gene is 189352927

Identifier: 189352927

GI number: 189352927

Start: 1079519

End: 1080496

Strand: Direct

Name: 189352927

Synonym: BMULJ_04161

Alternate gene names: NA

Gene position: 1079519-1080496 (Clockwise)

Preceding gene: 189352926

Following gene: 189352928

Centisome position: 43.65

GC content: 64.01

Gene sequence:

>978_bases
ATGGCAATAAACATCTGTATTCGCATTGCATTGTCCGCCGCGATTTCTTGCGTTGCGTTGCCCGCGCTTGCTCAGGCGGG
TGAAACGGTGGCGGCCTGGACTGCCAAACCCGCACATGCGTGGACTGCACCGACCCACATGATGCTGATGGACGCGGCGC
GCGCGGGGCGGCGCGTCGTCACGGTCGGCGAGCACGGACTCGTCCTTCTTTCGGACGACGACGGGCGAACATGGAGACAA
GCCCGGAGCGTCCCGGTCGCAGCGACGCTCTCGGCCGTGACGTTTGTCGATGCCGGCCATGGCTGGGCGGTCGGTCAGTG
GGGCGTCATTCTCGCGACGAGCGATGGCGGTGAGACCTGGCACAAGCAACGGCTCGATCTGTCGACCGATCAACCGTTGT
TTTCGGTCGCCTTCACGAGCCCGAACGACGGGATCGCGGTTGGCCTGTGGTCGCTGATGCTGGCCACGCATGACGGCGGC
AAGACGTGGGAGAGGGTGACGTTGCCGAAGCCGCCGGGCGGCGGGAAAGCCGACCGCAATCTGTATCACATTTTTTTCGA
TGGCAAGGCCGCCCTTTACGTCGTCTCCGAGTCCGGAATGGTACTCAAGTCGGCCGATCGGGGCGCGAACTGGGCGTACG
TCGCGACTGGCGGGAAGGGCACGTTATGGACCGGCGTGGCATTGCCGGGCGGCCGTATCGTGGTTGGCGGCTTGTTAGGG
AGCATGTTTGAAAGCACGGACGGAGGCGCGAGCTGGCGTGCGGTCAGTACGGGAACGAAGAGTTCGATCACGGATCTGGT
CGCCACCGATGCGGGCCTGATGGGTGTCGGGCTCGATGGATTGATTCTCGCCCAACGGGACGGTGAAACGACGGTCACCG
TCTCGCAACGTGCAGATCGCGCGACGCTGACAGCAGCGGTGATCGCAGCCGACCGAAAACCGATTCTCGTCTCGCAAGAC
GGGGTGCTCGCGCCTTGA

Upstream 100 bases:

>100_bases
TGCGTCGGTGCTGGAGCGCTGGTTTCCGCGCCGCAAGCCGGCGCGTGCACCGGGACTGTTCAGTCACTGACTCGACGTTT
CCCCTTCAGGAGCCTGAACA

Downstream 100 bases:

>100_bases
AGCGGGAACGACGTCTTTGCGACGGCAGCCGATAGCCTCAAGGGCGCCGGCATCGCAGAGACGAAGCAATGTGGCATGCG
GAATCACACCGGGGAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MAINICIRIALSAAISCVALPALAQAGETVAAWTAKPAHAWTAPTHMMLMDAARAGRRVVTVGEHGLVLLSDDDGRTWRQ
ARSVPVAATLSAVTFVDAGHGWAVGQWGVILATSDGGETWHKQRLDLSTDQPLFSVAFTSPNDGIAVGLWSLMLATHDGG
KTWERVTLPKPPGGGKADRNLYHIFFDGKAALYVVSESGMVLKSADRGANWAYVATGGKGTLWTGVALPGGRIVVGGLLG
SMFESTDGGASWRAVSTGTKSSITDLVATDAGLMGVGLDGLILAQRDGETTVTVSQRADRATLTAAVIAADRKPILVSQD
GVLAP

Sequences:

>Translated_325_residues
MAINICIRIALSAAISCVALPALAQAGETVAAWTAKPAHAWTAPTHMMLMDAARAGRRVVTVGEHGLVLLSDDDGRTWRQ
ARSVPVAATLSAVTFVDAGHGWAVGQWGVILATSDGGETWHKQRLDLSTDQPLFSVAFTSPNDGIAVGLWSLMLATHDGG
KTWERVTLPKPPGGGKADRNLYHIFFDGKAALYVVSESGMVLKSADRGANWAYVATGGKGTLWTGVALPGGRIVVGGLLG
SMFESTDGGASWRAVSTGTKSSITDLVATDAGLMGVGLDGLILAQRDGETTVTVSQRADRATLTAAVIAADRKPILVSQD
GVLAP
>Mature_324_residues
AINICIRIALSAAISCVALPALAQAGETVAAWTAKPAHAWTAPTHMMLMDAARAGRRVVTVGEHGLVLLSDDDGRTWRQA
RSVPVAATLSAVTFVDAGHGWAVGQWGVILATSDGGETWHKQRLDLSTDQPLFSVAFTSPNDGIAVGLWSLMLATHDGGK
TWERVTLPKPPGGGKADRNLYHIFFDGKAALYVVSESGMVLKSADRGANWAYVATGGKGTLWTGVALPGGRIVVGGLLGS
MFESTDGGASWRAVSTGTKSSITDLVATDAGLMGVGLDGLILAQRDGETTVTVSQRADRATLTAAVIAADRKPILVSQDG
VLAP

Specific function: Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity [H]

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 BNR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002860
- InterPro:   IPR016705 [H]

Pfam domain/function: PF02012 BNR [H]

EC number: NA

Molecular weight: Translated: 33738; Mature: 33607

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINICIRIALSAAISCVALPALAQAGETVAAWTAKPAHAWTAPTHMMLMDAARAGRRVV
CEEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEEEHHHHCCCEEE
TVGEHGLVLLSDDDGRTWRQARSVPVAATLSAVTFVDAGHGWAVGQWGVILATSDGGETW
EECCCCEEEEECCCCCHHHHHCCCCEEEEEEEEEEEECCCCEEECCCEEEEEECCCCCCH
HKQRLDLSTDQPLFSVAFTSPNDGIAVGLWSLMLATHDGGKTWERVTLPKPPGGGKADRN
HHHHCCCCCCCCEEEEEEECCCCCEEHEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCC
LYHIFFDGKAALYVVSESGMVLKSADRGANWAYVATGGKGTLWTGVALPGGRIVVGGLLG
EEEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEHHHH
SMFESTDGGASWRAVSTGTKSSITDLVATDAGLMGVGLDGLILAQRDGETTVTVSQRADR
HHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEECCCCC
ATLTAAVIAADRKPILVSQDGVLAP
CEEEEEEEECCCCCEEEECCCCCCC
>Mature Secondary Structure 
AINICIRIALSAAISCVALPALAQAGETVAAWTAKPAHAWTAPTHMMLMDAARAGRRVV
EEEEEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHEEEHHHHCCCEEE
TVGEHGLVLLSDDDGRTWRQARSVPVAATLSAVTFVDAGHGWAVGQWGVILATSDGGETW
EECCCCEEEEECCCCCHHHHHCCCCEEEEEEEEEEEECCCCEEECCCEEEEEECCCCCCH
HKQRLDLSTDQPLFSVAFTSPNDGIAVGLWSLMLATHDGGKTWERVTLPKPPGGGKADRN
HHHHCCCCCCCCEEEEEEECCCCCEEHEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCC
LYHIFFDGKAALYVVSESGMVLKSADRGANWAYVATGGKGTLWTGVALPGGRIVVGGLLG
EEEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEECCCCEEEEEEECCCCEEEEEHHHH
SMFESTDGGASWRAVSTGTKSSITDLVATDAGLMGVGLDGLILAQRDGETTVTVSQRADR
HHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCEEEEEECCCCC
ATLTAAVIAADRKPILVSQDGVLAP
CEEEEEEEECCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]