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The map label for this gene is nirK [H]

Identifier: 189352923

GI number: 189352923

Start: 1073020

End: 1073520

Strand: Direct

Name: nirK [H]

Synonym: BMULJ_04157

Alternate gene names: 189352923

Gene position: 1073020-1073520 (Clockwise)

Preceding gene: 189352922

Following gene: 189352924

Centisome position: 43.39

GC content: 60.68

Gene sequence:

>501_bases
ATGAAAGTAAAGCACGCAGGACGAGGATCGATCATTGGCGGCATGTATGTCGCTCTGTATGTCTGGTCGGGCGCGGCGCT
CGCCCAGCAAGCGGTTCATTACCCTGCCGGAAAGACGCTGTTCGACGCGCAATGTGCCGTGTGTCACCAGGCCGGCGGAA
ACGGACAAGACGGCCTCGCGCCGCCCCTGACCGAATATCCGGGCAGATACGCAACCACGGAAAAGGGGCGCGCGCAACTT
GCCGCCACGCTGTTGAACGGGATGGTCGGCGAGGTCAAGGTTCGCGACAAGCGCTACGACTTCAGAATGCCGTCGTTCGC
CGCAGCGAACGACGACGACATCGCACAGGTCCTCAATTACGTCGTGTTCGACTTGAACGCGAAACACGGCAAAGCGAAGC
CGTTTACGGCAACGGATATTCGCGTGGCGCGTGGAAAACCGATGGAGGGTGCTGCCGTCCGGGCACAGCGCGAAATCGTG
ACGAAGGAACTGGGACTCTGA

Upstream 100 bases:

>100_bases
ACATACGAACCATCGTGGGCCACGACGGTGGTGCCCAGTAGCCAAGCCGGTGCAAGAAGATGCGCACCTTCGACAACCGC
AGTCGTTATCGGTAGAAGCA

Downstream 100 bases:

>100_bases
AGGTTCCAATCGCTTCACGGCAGTGCAGGATCGGGATGGTGGGACGCGGCTTCGCCCGAAGCGATATAGCCCGTCGTTGC
TGAACGCCTCGCGATCGAAC

Product: NO-forming nitrite reductase

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKVKHAGRGSIIGGMYVALYVWSGAALAQQAVHYPAGKTLFDAQCAVCHQAGGNGQDGLAPPLTEYPGRYATTEKGRAQL
AATLLNGMVGEVKVRDKRYDFRMPSFAAANDDDIAQVLNYVVFDLNAKHGKAKPFTATDIRVARGKPMEGAAVRAQREIV
TKELGL

Sequences:

>Translated_166_residues
MKVKHAGRGSIIGGMYVALYVWSGAALAQQAVHYPAGKTLFDAQCAVCHQAGGNGQDGLAPPLTEYPGRYATTEKGRAQL
AATLLNGMVGEVKVRDKRYDFRMPSFAAANDDDIAQVLNYVVFDLNAKHGKAKPFTATDIRVARGKPMEGAAVRAQREIV
TKELGL
>Mature_166_residues
MKVKHAGRGSIIGGMYVALYVWSGAALAQQAVHYPAGKTLFDAQCAVCHQAGGNGQDGLAPPLTEYPGRYATTEKGRAQL
AATLLNGMVGEVKVRDKRYDFRMPSFAAANDDDIAQVLNYVVFDLNAKHGKAKPFTATDIRVARGKPMEGAAVRAQREIV
TKELGL

Specific function: This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 17808; Mature: 17808

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKHAGRGSIIGGMYVALYVWSGAALAQQAVHYPAGKTLFDAQCAVCHQAGGNGQDGLA
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCC
PPLTEYPGRYATTEKGRAQLAATLLNGMVGEVKVRDKRYDFRMPSFAAANDDDIAQVLNY
CCHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
VVFDLNAKHGKAKPFTATDIRVARGKPMEGAAVRAQREIVTKELGL
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKHAGRGSIIGGMYVALYVWSGAALAQQAVHYPAGKTLFDAQCAVCHQAGGNGQDGLA
CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCC
PPLTEYPGRYATTEKGRAQLAATLLNGMVGEVKVRDKRYDFRMPSFAAANDDDIAQVLNY
CCHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHH
VVFDLNAKHGKAKPFTATDIRVARGKPMEGAAVRAQREIVTKELGL
HHHCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2986626; 11152119 [H]