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The map label for this gene is hpaR [H]

Identifier: 189352897

GI number: 189352897

Start: 1045050

End: 1045496

Strand: Reverse

Name: hpaR [H]

Synonym: BMULJ_04131

Alternate gene names: 189352897

Gene position: 1045496-1045050 (Counterclockwise)

Preceding gene: 189352906

Following gene: 189352895

Centisome position: 42.27

GC content: 64.65

Gene sequence:

>447_bases
ATGAACCGTACGCTCGACCATCGCAATCTGGCCATGCTGCTGCTCGAGGCCCGCGAAACGCTCATGGGCCTGTTCCGCCC
CATTCTCAAGGAATTTGCACTGACGGAGCAGCAATGGCGGATCATCCGCGTGCTCGACGGCGAGCCGGGGCAGTCGCTCG
AAGCAGGACAGATTGCGCGGCGCTGCTGCATTCTGAGCCCGAGCCTCACGGGCGTGCTCGAACGCATGGAGCGCGACGGG
CTGATCACGCGCACGCGCGCTCAGGAGGATCAGCGTCGGCTCGTGGTCAGCCTGACGCCGCAAAGCAGAAAGCTCGTCAC
GGAGATCGGCCCGCGCATCGACGAACAGTATCGGCTGCTCGAAGCGCGCTTCGGCCAGGACGGCCTCGACGACATCTATC
GCGCGCTCGATCGCTTGATCGAGCTCGGCAACGGCATGTCGTCGTGA

Upstream 100 bases:

>100_bases
AAGTAAACAAAGCGACGCTGACAACCTCGATTACCCTGATAGACGAATTTCACCACCGTCGGCTGTTAAGATTCATCCGT
CCCATTCACCGCATCCCCCG

Downstream 100 bases:

>100_bases
CGTCCTTGCGTGCCGGCGTGGCCGTGCGCGAACGGTACGTACGCGTGCGGCACCGTCAGTCTCGCGCGCCGCGCATCAGG
TCGGTCACCGGGATCCCGCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNRTLDHRNLAMLLLEARETLMGLFRPILKEFALTEQQWRIIRVLDGEPGQSLEAGQIARRCCILSPSLTGVLERMERDG
LITRTRAQEDQRRLVVSLTPQSRKLVTEIGPRIDEQYRLLEARFGQDGLDDIYRALDRLIELGNGMSS

Sequences:

>Translated_148_residues
MNRTLDHRNLAMLLLEARETLMGLFRPILKEFALTEQQWRIIRVLDGEPGQSLEAGQIARRCCILSPSLTGVLERMERDG
LITRTRAQEDQRRLVVSLTPQSRKLVTEIGPRIDEQYRLLEARFGQDGLDDIYRALDRLIELGNGMSS
>Mature_148_residues
MNRTLDHRNLAMLLLEARETLMGLFRPILKEFALTEQQWRIIRVLDGEPGQSLEAGQIARRCCILSPSLTGVLERMERDG
LITRTRAQEDQRRLVVSLTPQSRKLVTEIGPRIDEQYRLLEARFGQDGLDDIYRALDRLIELGNGMSS

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17005; Mature: 17005

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTLDHRNLAMLLLEARETLMGLFRPILKEFALTEQQWRIIRVLDGEPGQSLEAGQIAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCHHHHHHH
RCCILSPSLTGVLERMERDGLITRTRAQEDQRRLVVSLTPQSRKLVTEIGPRIDEQYRLL
HHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHCEEEEEECCCHHHHHHHHCCCHHHHHHHH
EARFGQDGLDDIYRALDRLIELGNGMSS
HHHCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRTLDHRNLAMLLLEARETLMGLFRPILKEFALTEQQWRIIRVLDGEPGQSLEAGQIAR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCHHHHHHH
RCCILSPSLTGVLERMERDGLITRTRAQEDQRRLVVSLTPQSRKLVTEIGPRIDEQYRLL
HHHHCCCHHHHHHHHHHHCCCEEHHHHHHHHCEEEEEECCCHHHHHHHHCCCHHHHHHHH
EARFGQDGLDDIYRALDRLIELGNGMSS
HHHCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]