| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
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The map label for this gene is manB
Identifier: 189352878
GI number: 189352878
Start: 1019755
End: 1022232
Strand: Reverse
Name: manB
Synonym: BMULJ_04112
Alternate gene names: NA
Gene position: 1022232-1019755 (Counterclockwise)
Preceding gene: 189352879
Following gene: 189352876
Centisome position: 41.33
GC content: 72.44
Gene sequence:
>2478_bases ATGACGCGGTCCGACGCCGCGCCCGCGTGGTCGATGCTGACGACCGACGCGGGCGCCGCGCACGAACCGCGCGAATTGCC GACCGAACGAGGCTGGATCGACGCACCGGTGCCCGGCACGGTCGCGCAGGCGCTCGCGCTGGCGGGCCGCGCCGACGAGA TCGCGTCGCTCGCCGAGCACGATCACTGGTACCGCACGGAACTGCACGGCCACGGGCCGCGCGTGCTGCGCTTCCACGGC CTCGCGACGCTCGCCGACGTATGGCTCGACGACACGCCGATCCTGCAGTCGCACAGCATGTTCGTCTCGCACGATGTTCC CGTCTCGCTCGACGGCGCGCACCGGCTCACCGTCCGCTTCCGCGCGCTGGCGCCGCATCTGCGCGAGGTGCGCGCGGCGC GGCGCGCACGCTGGCGCACGCGGCTCGCCGAACCGGCCGGCCTGCGCGCGGTGCGCACGTCGCTGTTCGGGCACATGCCC GGCTGGTTTCCGCCCTACGTGCCGACCGGCCCGTGGCGGCCGGTCGACGTGCTCGATCCGGCGCTCGGCCCCGTGATCGT GCATCGCGACCTGCAGGCACGCGTCGACGGCGACACCGGCTGGCTCGACGCGGAGCTGGGTTTCGCGTCGCCGCTGCCCG ACGATGCGGTCGTGCGGCTCGCCTGCGGCGAGCACGTCGCGACGCTCGAACGCGTAGCGCCCGACCGCGTACGCGGGAGC GTCGCCGTACCGAACGTCCGGCGCTGGTGGCCGCATACGCACGGCGAACCCGTGCTGTACGACGTCGAGTTGCATGTCGG CGGCGAACGTCGCCCGCTCGGCACGACCGGTTTCCGTACGATCGAAGTCGACGCCGGCGCGGACGGCAAGGGCTTCGCCC TGCGCGTCAACGGCGTGCCGGTGTTTGCGCGCGGCGCGTGCTGGAGCAGCGCCGCGCCGCTCGCCTTGCATGCGGACGAC GCGACCTACCGGCGTCTGCTCGGCTATGCGCGCGACGCCGGCTTCAACATGATTCGCGTCGGCGGCACGATGACCTACGA AGCCGATGCGTTCCATGCGTGGTGCGACCGGCTCGGGCTGCTCGTCTGGCACGACTTCATGTTCGCGAACTTCGACTACG CGCTCGACGATCCGGCGTTCGCCGATGCCGTCGACCGCGAAGCCGATCAGTTCCTGCTGCGTCATCGCGCGTCCCCGTCG CTTGCGGTGCTGTGCGGCGGCAGCGAGATCGCGCAGCAGGCGGCAATGTCGGGCCTCGGCGCGAAACAGCGCTTTCTCGA GCTGACGGCCGAGCGGCTGGCGGCCCACGCTGCCGCCCGCCGGCCGGACGTCGCGTACGTCTCCGACTCGCCGGACGGCG GCGTGCTGCCGTTCGTGCCGCGCGAGCGCGTGTCGCACTACTACGGCGTCGGCGCGTATCTACGCCCGCTCGAGGACGCG CGCCGCGCCGACGTGCGCTTCGCGAGCGAATGTCTTGCGTTCGCGAACGTGCCGTCCAACGCGACGCTCGACGAGCTCGG CTGGCCGGGCGTGCACGAACCGCGCTGGAAGGCGGCGGTGCCGCGCGACCCCGGCACGTCGTGGGATTTCGACGACGTGC GCGACCACTATTTGCGCACGCTCTACGATGTGACGCCCGATCGCCTGCGACGCGAGGATCCGGCACGCTACTTCGAACTG TCGCGCGCGGTGATCGCCGACGTGATGCGCGACACCTATTCCGAATGGCGCCGCAACGGGTCGCGCTGCGCGGGCGCCCT CGTCTGGCAGTTCCAGGACGTGATGCCGGGCGCCGGCTGGGGCGTGATCGACGCCTTGCATCGGCCGAAATCGGCATGGT ACGCGTTGCGCCAGGTGCTGCAGCCGGTGCAGGTGCTGCTCGTCGACGAAGGGCTCAACGGGCTCGACGTGCACGTGCTC AACGAGCGGCCGGCGCCGCTATCCGCGACGGTCGAGCTCGTCGCGCTGCGCGACGGCCGCACGCCGGTCGCGCGCGCCGG CTGCCCGGTGCGGATCGCCGCGCACGATACGCTGCGGCTCGGCTCGGCCGAACTGCTCGGCCGGTTCTTCGACTGGACCT ACGCGTACCGTTTCGGCCCGTGCGAGCACGACACCGCGGTCGCGACGCTGCGCGCGGACGACGGCACGCTGCTGTCGCAA GCGTTCTACTTCCCGTCGCGCACGCATCCGGTCGTGTTCGCGCGTCGCGAGCTCGGCCTCGAGGCCTGCGTGTCGCGCAG CGGCGACGTCTGGCATGTCGACATCGACACGCGCCACGTCGCGCGCCACGTGCAGATCGACGCGCCCGGCTTCGTGCCGC GCGACGACTGGTTCCATCTCGCGCCCGACACGCCCGCGCGCGTCGCGCTCATTCCGCTCGAGGGCGATCCGGCACGCGCG GCGGCCGACGCGGCGCCGGTCGTCGAGATCCGTGCGATGAATGCCGCGCGCACCGTGCGCGCGACGCAGGCGGGCTAA
Upstream 100 bases:
>100_bases CCGCGTATCACGATCTGATCGCGTGCGCGCGCCAGATCGCGCCGCCGCTGCTGCATCGCGCACCGATACGCCACGACGCG GCGGCGATGCCGCTCGGCCG
Downstream 100 bases:
>100_bases CCGCGCACAGCGGCGCAGCGGCATACCGGTACACCGCTGCGCCGCGCGAATCGAATCGGTTCGATGAAGGTCCGCGGCGC AAGCCGCGGCCGGAGGTGGT
Product: beta-mannosidase
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Beta-Mannosidase Protein; Glycoside Hydrolase; Mannosidase; Glycoside Hydrolase Family 2 Protein; Glycosidase; Beta-Galactosidase/Beta-Glucuronidase; Beta-Glucuronidase; Exported Glycosyl Hydrolase; Beta-Galactosidase/Beta- Glucuronidase Family Protein; O-Glycosyl Hydrolase; Beta-Mannosidase Man2A; Mannosylglycoprotein Endo-Beta-Mannosidase; Beta-Mannosidase-Related Protein; BETA-Mannosidase Protein; Glycosyl Hydrolase Family Protein; Glycoside Hydrolase Family 2 TIM Barrel
Number of amino acids: Translated: 825; Mature: 824
Protein sequence:
>825_residues MTRSDAAPAWSMLTTDAGAAHEPRELPTERGWIDAPVPGTVAQALALAGRADEIASLAEHDHWYRTELHGHGPRVLRFHG LATLADVWLDDTPILQSHSMFVSHDVPVSLDGAHRLTVRFRALAPHLREVRAARRARWRTRLAEPAGLRAVRTSLFGHMP GWFPPYVPTGPWRPVDVLDPALGPVIVHRDLQARVDGDTGWLDAELGFASPLPDDAVVRLACGEHVATLERVAPDRVRGS VAVPNVRRWWPHTHGEPVLYDVELHVGGERRPLGTTGFRTIEVDAGADGKGFALRVNGVPVFARGACWSSAAPLALHADD ATYRRLLGYARDAGFNMIRVGGTMTYEADAFHAWCDRLGLLVWHDFMFANFDYALDDPAFADAVDREADQFLLRHRASPS LAVLCGGSEIAQQAAMSGLGAKQRFLELTAERLAAHAAARRPDVAYVSDSPDGGVLPFVPRERVSHYYGVGAYLRPLEDA RRADVRFASECLAFANVPSNATLDELGWPGVHEPRWKAAVPRDPGTSWDFDDVRDHYLRTLYDVTPDRLRREDPARYFEL SRAVIADVMRDTYSEWRRNGSRCAGALVWQFQDVMPGAGWGVIDALHRPKSAWYALRQVLQPVQVLLVDEGLNGLDVHVL NERPAPLSATVELVALRDGRTPVARAGCPVRIAAHDTLRLGSAELLGRFFDWTYAYRFGPCEHDTAVATLRADDGTLLSQ AFYFPSRTHPVVFARRELGLEACVSRSGDVWHVDIDTRHVARHVQIDAPGFVPRDDWFHLAPDTPARVALIPLEGDPARA AADAAPVVEIRAMNAARTVRATQAG
Sequences:
>Translated_825_residues MTRSDAAPAWSMLTTDAGAAHEPRELPTERGWIDAPVPGTVAQALALAGRADEIASLAEHDHWYRTELHGHGPRVLRFHG LATLADVWLDDTPILQSHSMFVSHDVPVSLDGAHRLTVRFRALAPHLREVRAARRARWRTRLAEPAGLRAVRTSLFGHMP GWFPPYVPTGPWRPVDVLDPALGPVIVHRDLQARVDGDTGWLDAELGFASPLPDDAVVRLACGEHVATLERVAPDRVRGS VAVPNVRRWWPHTHGEPVLYDVELHVGGERRPLGTTGFRTIEVDAGADGKGFALRVNGVPVFARGACWSSAAPLALHADD ATYRRLLGYARDAGFNMIRVGGTMTYEADAFHAWCDRLGLLVWHDFMFANFDYALDDPAFADAVDREADQFLLRHRASPS LAVLCGGSEIAQQAAMSGLGAKQRFLELTAERLAAHAAARRPDVAYVSDSPDGGVLPFVPRERVSHYYGVGAYLRPLEDA RRADVRFASECLAFANVPSNATLDELGWPGVHEPRWKAAVPRDPGTSWDFDDVRDHYLRTLYDVTPDRLRREDPARYFEL SRAVIADVMRDTYSEWRRNGSRCAGALVWQFQDVMPGAGWGVIDALHRPKSAWYALRQVLQPVQVLLVDEGLNGLDVHVL NERPAPLSATVELVALRDGRTPVARAGCPVRIAAHDTLRLGSAELLGRFFDWTYAYRFGPCEHDTAVATLRADDGTLLSQ AFYFPSRTHPVVFARRELGLEACVSRSGDVWHVDIDTRHVARHVQIDAPGFVPRDDWFHLAPDTPARVALIPLEGDPARA AADAAPVVEIRAMNAARTVRATQAG >Mature_824_residues TRSDAAPAWSMLTTDAGAAHEPRELPTERGWIDAPVPGTVAQALALAGRADEIASLAEHDHWYRTELHGHGPRVLRFHGL ATLADVWLDDTPILQSHSMFVSHDVPVSLDGAHRLTVRFRALAPHLREVRAARRARWRTRLAEPAGLRAVRTSLFGHMPG WFPPYVPTGPWRPVDVLDPALGPVIVHRDLQARVDGDTGWLDAELGFASPLPDDAVVRLACGEHVATLERVAPDRVRGSV AVPNVRRWWPHTHGEPVLYDVELHVGGERRPLGTTGFRTIEVDAGADGKGFALRVNGVPVFARGACWSSAAPLALHADDA TYRRLLGYARDAGFNMIRVGGTMTYEADAFHAWCDRLGLLVWHDFMFANFDYALDDPAFADAVDREADQFLLRHRASPSL AVLCGGSEIAQQAAMSGLGAKQRFLELTAERLAAHAAARRPDVAYVSDSPDGGVLPFVPRERVSHYYGVGAYLRPLEDAR RADVRFASECLAFANVPSNATLDELGWPGVHEPRWKAAVPRDPGTSWDFDDVRDHYLRTLYDVTPDRLRREDPARYFELS RAVIADVMRDTYSEWRRNGSRCAGALVWQFQDVMPGAGWGVIDALHRPKSAWYALRQVLQPVQVLLVDEGLNGLDVHVLN ERPAPLSATVELVALRDGRTPVARAGCPVRIAAHDTLRLGSAELLGRFFDWTYAYRFGPCEHDTAVATLRADDGTLLSQA FYFPSRTHPVVFARRELGLEACVSRSGDVWHVDIDTRHVARHVQIDAPGFVPRDDWFHLAPDTPARVALIPLEGDPARAA ADAAPVVEIRAMNAARTVRATQAG
Specific function: Unknown
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI84798622, Length=774, Percent_Identity=22.609819121447, Blast_Score=133, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17550784, Length=498, Percent_Identity=25.9036144578313, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI24643838, Length=383, Percent_Identity=27.9373368146214, Blast_Score=103, Evalue=5e-22, Organism=Drosophila melanogaster, GI24643840, Length=203, Percent_Identity=33.4975369458128, Blast_Score=97, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91032; Mature: 90900
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSDAAPAWSMLTTDAGAAHEPRELPTERGWIDAPVPGTVAQALALAGRADEIASLAEH CCCCCCCCCHHEEECCCCCCCCCHHCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHC DHWYRTELHGHGPRVLRFHGLATLADVWLDDTPILQSHSMFVSHDVPVSLDGAHRLTVRF CCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCEEEEEEE RALAPHLREVRAARRARWRTRLAEPAGLRAVRTSLFGHMPGWFPPYVPTGPWRPVDVLDP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC ALGPVIVHRDLQARVDGDTGWLDAELGFASPLPDDAVVRLACGEHVATLERVAPDRVRGS CCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHEEEEECCCHHHHHHHHCHHHHCCC VAVPNVRRWWPHTHGEPVLYDVELHVGGERRPLGTTGFRTIEVDAGADGKGFALRVNGVP CCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEE VFARGACWSSAAPLALHADDATYRRLLGYARDAGFNMIRVGGTMTYEADAFHAWCDRLGL EEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCEEEECCHHHHHHHHHHHH LVWHDFMFANFDYALDDPAFADAVDREADQFLLRHRASPSLAVLCGGSEIAQQAAMSGLG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC AKQRFLELTAERLAAHAAARRPDVAYVSDSPDGGVLPFVPRERVSHYYGVGAYLRPLEDA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH RRADVRFASECLAFANVPSNATLDELGWPGVHEPRWKAAVPRDPGTSWDFDDVRDHYLRT HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LYDVTPDRLRREDPARYFELSRAVIADVMRDTYSEWRRNGSRCAGALVWQFQDVMPGAGW HHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC GVIDALHRPKSAWYALRQVLQPVQVLLVDEGLNGLDVHVLNERPAPLSATVELVALRDGR HHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCC TPVARAGCPVRIAAHDTLRLGSAELLGRFFDWTYAYRFGPCEHDTAVATLRADDGTLLSQ CCHHHCCCCEEEECCCCEECCCHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCHHHH AFYFPSRTHPVVFARRELGLEACVSRSGDVWHVDIDTRHVARHVQIDAPGFVPRDDWFHL HHCCCCCCCCEEEEHHHHCHHHHHCCCCCEEEEECCHHHHHEEEEECCCCCCCCCCCEEE APDTPARVALIPLEGDPARAAADAAPVVEIRAMNAARTVRATQAG CCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCHHHHEEECCCC >Mature Secondary Structure TRSDAAPAWSMLTTDAGAAHEPRELPTERGWIDAPVPGTVAQALALAGRADEIASLAEH CCCCCCCCHHEEECCCCCCCCCHHCCCCCCEECCCCCHHHHHHHHHCCCHHHHHHHHHC DHWYRTELHGHGPRVLRFHGLATLADVWLDDTPILQSHSMFVSHDVPVSLDGAHRLTVRF CCEEEEEECCCCCEEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCCEEECCCEEEEEEE RALAPHLREVRAARRARWRTRLAEPAGLRAVRTSLFGHMPGWFPPYVPTGPWRPVDVLDP HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC ALGPVIVHRDLQARVDGDTGWLDAELGFASPLPDDAVVRLACGEHVATLERVAPDRVRGS CCCCEEEECCCCEEECCCCCEEEECCCCCCCCCCHHEEEEECCCHHHHHHHHCHHHHCCC VAVPNVRRWWPHTHGEPVLYDVELHVGGERRPLGTTGFRTIEVDAGADGKGFALRVNGVP CCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEECCEE VFARGACWSSAAPLALHADDATYRRLLGYARDAGFNMIRVGGTMTYEADAFHAWCDRLGL EEECCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCEEEECCHHHHHHHHHHHH LVWHDFMFANFDYALDDPAFADAVDREADQFLLRHRASPSLAVLCGGSEIAQQAAMSGLG HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCC AKQRFLELTAERLAAHAAARRPDVAYVSDSPDGGVLPFVPRERVSHYYGVGAYLRPLEDA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH RRADVRFASECLAFANVPSNATLDELGWPGVHEPRWKAAVPRDPGTSWDFDDVRDHYLRT HHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LYDVTPDRLRREDPARYFELSRAVIADVMRDTYSEWRRNGSRCAGALVWQFQDVMPGAGW HHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC GVIDALHRPKSAWYALRQVLQPVQVLLVDEGLNGLDVHVLNERPAPLSATVELVALRDGR HHHHHHHCCHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCC TPVARAGCPVRIAAHDTLRLGSAELLGRFFDWTYAYRFGPCEHDTAVATLRADDGTLLSQ CCHHHCCCCEEEECCCCEECCCHHHHHHHHHHEEEEEECCCCCCCEEEEEECCCCCHHHH AFYFPSRTHPVVFARRELGLEACVSRSGDVWHVDIDTRHVARHVQIDAPGFVPRDDWFHL HHCCCCCCCCEEEEHHHHCHHHHHCCCCCEEEEECCHHHHHEEEEECCCCCCCCCCCEEE APDTPARVALIPLEGDPARAAADAAPVVEIRAMNAARTVRATQAG CCCCCCEEEEEEECCCCCHHHCCCCCEEEEEECCHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA