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The map label for this gene is yhcA [H]

Identifier: 189352801

GI number: 189352801

Start: 921029

End: 921877

Strand: Direct

Name: yhcA [H]

Synonym: BMULJ_04033

Alternate gene names: 189352801

Gene position: 921029-921877 (Clockwise)

Preceding gene: 189352800

Following gene: 189352802

Centisome position: 37.24

GC content: 63.02

Gene sequence:

>849_bases
ATGTTTCATTTCACTCGCTTGCTGCCGGCGCTGCTGCCGCTCGTTCTCACTGCCGGCCCGACGGCACCGGCTCACGCGGC
CGGGATGGTGCCGGAAACCTCCGTCGTTTTGATCGACGAGGCCGTTGGCGAAACCGCGATGAAAGTGCGGAACACCGACG
ACAAGCCGGCGCTGCTCTACACGATCATCGAGCACGTGCCCGACGATCAGGAGAAGCTGTTCACCGTGACGCCGCCCGTT
GCACGCGTGGACCCCGGACAGACCCAGCTGGTCCGTTTCATTCTGACGAACAAGACGCCGCTGAAGACCGAACGGCTCGC
GCGTGTGGTGTTCGACACCATCGGCGAGCGCAAGGATCCCGACGCGAGCGTCGTCGCGATTCGCGTTCGGCAGAACTTGC
CGGTGATCATGCACCCGAAGGGACTGGCGGTGAATCGCGAACCGTGGAAGCTGCTGAAGTGGGAGTCCGTCGACGGCAAA
TTACGCGTCGTGAATCCGAGCCCGTACGTCGTGCGGCTCGGCGCGACCGTCGAGGTGCTTCCGATGAAAAAGCAGGCGTA
CTTGCCGAACACGTACATGCTGCCCGGTCAGTCGACCTACGTGATGATGCCGAAGGATGACAAACGGCAGGACGCGCCGC
GCAAACCGTCTGCGAAGCATGCCGACGTGACGGCCGGGACGAAGGCCGAGGTCGAGAACATGCTCAAGCTATTCCCCGGC
GCCACATCGATTCGCTTCCAGCCTGCAACGAGCTACGGCTACATGGCGGACATCTACGAGGCGCGGATCGAAACGTCGAC
GAAAGACCGCGAAACGAGCGCGGTGCAGGGTGGTCCCACATCGCGGTGA

Upstream 100 bases:

>100_bases
GAGCGGCGAGGTGACGGTCGCGTCGGAGCCTCGCTTCAGTGTCGTTTCCTCCCCTTGAATGCGTTTTGTTCGATTGTTTT
TTTAACTGTATGGAGCACTG

Downstream 100 bases:

>100_bases
CGATCGAGATCGGTATCGATGATTGGCAAGCAATTTGGAACTTGTTCTATATAAATTCGGATCACTGATCAATAGAATCC
ATCGTGTCCGATTTTGAGCC

Product: pilus assembly chaperone PapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MFHFTRLLPALLPLVLTAGPTAPAHAAGMVPETSVVLIDEAVGETAMKVRNTDDKPALLYTIIEHVPDDQEKLFTVTPPV
ARVDPGQTQLVRFILTNKTPLKTERLARVVFDTIGERKDPDASVVAIRVRQNLPVIMHPKGLAVNREPWKLLKWESVDGK
LRVVNPSPYVVRLGATVEVLPMKKQAYLPNTYMLPGQSTYVMMPKDDKRQDAPRKPSAKHADVTAGTKAEVENMLKLFPG
ATSIRFQPATSYGYMADIYEARIETSTKDRETSAVQGGPTSR

Sequences:

>Translated_282_residues
MFHFTRLLPALLPLVLTAGPTAPAHAAGMVPETSVVLIDEAVGETAMKVRNTDDKPALLYTIIEHVPDDQEKLFTVTPPV
ARVDPGQTQLVRFILTNKTPLKTERLARVVFDTIGERKDPDASVVAIRVRQNLPVIMHPKGLAVNREPWKLLKWESVDGK
LRVVNPSPYVVRLGATVEVLPMKKQAYLPNTYMLPGQSTYVMMPKDDKRQDAPRKPSAKHADVTAGTKAEVENMLKLFPG
ATSIRFQPATSYGYMADIYEARIETSTKDRETSAVQGGPTSR
>Mature_282_residues
MFHFTRLLPALLPLVLTAGPTAPAHAAGMVPETSVVLIDEAVGETAMKVRNTDDKPALLYTIIEHVPDDQEKLFTVTPPV
ARVDPGQTQLVRFILTNKTPLKTERLARVVFDTIGERKDPDASVVAIRVRQNLPVIMHPKGLAVNREPWKLLKWESVDGK
LRVVNPSPYVVRLGATVEVLPMKKQAYLPNTYMLPGQSTYVMMPKDDKRQDAPRKPSAKHADVTAGTKAEVENMLKLFPG
ATSIRFQPATSYGYMADIYEARIETSTKDRETSAVQGGPTSR

Specific function: Could be required for the biogenesis of a putative fimbria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1789609, Length=235, Percent_Identity=38.7234042553192, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR016148
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 31194; Mature: 31194

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHFTRLLPALLPLVLTAGPTAPAHAAGMVPETSVVLIDEAVGETAMKVRNTDDKPALLY
CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEECHHCHHHHEECCCCCCCHHHH
TIIEHVPDDQEKLFTVTPPVARVDPGQTQLVRFILTNKTPLKTERLARVVFDTIGERKDP
HHHHHCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
DASVVAIRVRQNLPVIMHPKGLAVNREPWKLLKWESVDGKLRVVNPSPYVVRLGATVEVL
CCEEEEEEEECCCCEEECCCCCEECCCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEE
PMKKQAYLPNTYMLPGQSTYVMMPKDDKRQDAPRKPSAKHADVTAGTKAEVENMLKLFPG
ECCHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
ATSIRFQPATSYGYMADIYEARIETSTKDRETSAVQGGPTSR
CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MFHFTRLLPALLPLVLTAGPTAPAHAAGMVPETSVVLIDEAVGETAMKVRNTDDKPALLY
CCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCEEEEEECHHCHHHHEECCCCCCCHHHH
TIIEHVPDDQEKLFTVTPPVARVDPGQTQLVRFILTNKTPLKTERLARVVFDTIGERKDP
HHHHHCCCCCCEEEEECCCCCCCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCC
DASVVAIRVRQNLPVIMHPKGLAVNREPWKLLKWESVDGKLRVVNPSPYVVRLGATVEVL
CCEEEEEEEECCCCEEECCCCCEECCCCCEEEEEECCCCEEEEECCCCEEEEECCEEEEE
PMKKQAYLPNTYMLPGQSTYVMMPKDDKRQDAPRKPSAKHADVTAGTKAEVENMLKLFPG
ECCHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
ATSIRFQPATSYGYMADIYEARIETSTKDRETSAVQGGPTSR
CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1447980; 9278503 [H]