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The map label for this gene is nrfC [H]

Identifier: 189352755

GI number: 189352755

Start: 867199

End: 867942

Strand: Direct

Name: nrfC [H]

Synonym: BMULJ_03987

Alternate gene names: 189352755

Gene position: 867199-867942 (Clockwise)

Preceding gene: 189352754

Following gene: 189352756

Centisome position: 35.06

GC content: 68.68

Gene sequence:

>744_bases
ATGACCCAGATGGCTCTCGTCATCGACCTGAACGTGTGCGTCGGCTGCCATGCCTGCGTGACGAGCTGCAAGGAGTGGAA
CACGTCGGGCGAAGCCGGCAGTCTCGCCGACGTGCGCCCGTACGACGACGATCCGTCGGGCACGTTCTTCAACCGCGTAC
AGACGTACGAGGCCGGCGTGTTCCCGATGACCGACACGATCCACTTCCCGAAGTCGTGCCTGCATTGCGAGGATCCGCCC
TGCGTGCCCGTGTGTCCTACCGGCGCGAGCTACAAGCGCAAGTCGGACGGGATCGTGCTCGTCGACTACGACAAGTGCAT
CGGCTGCAAGTATTGCGCGTGGGCGTGTCCGTACGGCGCGCGCGAGCTCGACGAAGCACGCAAGGAGATGACGAAGTGCA
CGCTGTGCGCGGACCGCATCGACAACGCGGCGCTGCCCGAACGCGATCGCAAGCCGGCCTGCGTGCTCGCATGCCCGACC
TCCGCGCGGCTGTTCGGCGACGTGCACGATCCCGAGTCGGACGTGTCGCGCGCGATACGCGAGCGCGGCGGCTATACGCT
GATGCCGGAGTGGGACACGCGGCCGTCGAACCACTACCTGCCGCGCGTCACGACGCAGCCGTCGTGCGGCTGCGGCAGCG
GCGGCGCATGCGGCAGCGCGTCGAGCGCGGGCGAGGACGATTCGTTCGAGGCGCGCGCCGCGCGCGGCGACATCGACCTC
GTCGCACTCGCCGCGTCGCGCTGA

Upstream 100 bases:

>100_bases
CAGGCGTATTTCGCGGGCACCGGCGCATTCGCCGCGCGGCTGCGGCGTGCCGCGTCGTCGGGCCCTCAGTCGGACGACCG
CTAAACGAAGGAGCGCAATC

Downstream 100 bases:

>100_bases
GCGCGCGATAGCGCAAGCACGCGATCTTCATACGCTGACTTCACTGCATCGACGGAGCCGACCATCATGCGTCCAGCCTT
CTCGGTCGTTTTTCTCACTA

Product: formate-dependent nitrite reductase Fe-S protein

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTQMALVIDLNVCVGCHACVTSCKEWNTSGEAGSLADVRPYDDDPSGTFFNRVQTYEAGVFPMTDTIHFPKSCLHCEDPP
CVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDEARKEMTKCTLCADRIDNAALPERDRKPACVLACPT
SARLFGDVHDPESDVSRAIRERGGYTLMPEWDTRPSNHYLPRVTTQPSCGCGSGGACGSASSAGEDDSFEARAARGDIDL
VALAASR

Sequences:

>Translated_247_residues
MTQMALVIDLNVCVGCHACVTSCKEWNTSGEAGSLADVRPYDDDPSGTFFNRVQTYEAGVFPMTDTIHFPKSCLHCEDPP
CVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDEARKEMTKCTLCADRIDNAALPERDRKPACVLACPT
SARLFGDVHDPESDVSRAIRERGGYTLMPEWDTRPSNHYLPRVTTQPSCGCGSGGACGSASSAGEDDSFEARAARGDIDL
VALAASR
>Mature_246_residues
TQMALVIDLNVCVGCHACVTSCKEWNTSGEAGSLADVRPYDDDPSGTFFNRVQTYEAGVFPMTDTIHFPKSCLHCEDPPC
VPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGARELDEARKEMTKCTLCADRIDNAALPERDRKPACVLACPTS
ARLFGDVHDPESDVSRAIRERGGYTLMPEWDTRPSNHYLPRVTTQPSCGCGSGGACGSASSAGEDDSFEARAARGDIDLV
ALAASR

Specific function: Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes [H]

COG id: COG0437

COG function: function code C; Fe-S-cluster-containing hydrogenase components 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI2367345, Length=200, Percent_Identity=36, Blast_Score=127, Evalue=9e-31,
Organism=Escherichia coli, GI1787122, Length=204, Percent_Identity=34.8039215686275, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1787872, Length=204, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1787749, Length=165, Percent_Identity=33.9393939393939, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI226510944, Length=174, Percent_Identity=37.3563218390805, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790326, Length=180, Percent_Identity=31.1111111111111, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1789370, Length=192, Percent_Identity=31.7708333333333, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787478, Length=109, Percent_Identity=37.6146788990826, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787740, Length=94, Percent_Identity=40.4255319148936, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1787963, Length=168, Percent_Identity=29.1666666666667, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1789067, Length=183, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI2367245, Length=165, Percent_Identity=32.1212121212121, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082180, Length=174, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87082179, Length=161, Percent_Identity=29.8136645962733, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788811, Length=243, Percent_Identity=26.7489711934156, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789079, Length=122, Percent_Identity=29.5081967213115, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017567
- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26670; Mature: 26539

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMALVIDLNVCVGCHACVTSCKEWNTSGEAGSLADVRPYDDDPSGTFFNRVQTYEAGV
CCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
FPMTDTIHFPKSCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGA
CCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCH
RELDEARKEMTKCTLCADRIDNAALPERDRKPACVLACPTSARLFGDVHDPESDVSRAIR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHEEECCCCCHHHHHHHHH
ERGGYTLMPEWDTRPSNHYLPRVTTQPSCGCGSGGACGSASSAGEDDSFEARAARGDIDL
HCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEE
VALAASR
EEEECCC
>Mature Secondary Structure 
TQMALVIDLNVCVGCHACVTSCKEWNTSGEAGSLADVRPYDDDPSGTFFNRVQTYEAGV
CCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
FPMTDTIHFPKSCLHCEDPPCVPVCPTGASYKRKSDGIVLVDYDKCIGCKYCAWACPYGA
CCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCH
RELDEARKEMTKCTLCADRIDNAALPERDRKPACVLACPTSARLFGDVHDPESDVSRAIR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHEEECCCCCHHHHHHHHH
ERGGYTLMPEWDTRPSNHYLPRVTTQPSCGCGSGGACGSASSAGEDDSFEARAARGDIDL
HCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEE
VALAASR
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]