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The map label for this gene is ycdL [C]

Identifier: 189352727

GI number: 189352727

Start: 831579

End: 832250

Strand: Reverse

Name: ycdL [C]

Synonym: BMULJ_03959

Alternate gene names: 189352727

Gene position: 832250-831579 (Counterclockwise)

Preceding gene: 189352728

Following gene: 189352726

Centisome position: 33.65

GC content: 69.64

Gene sequence:

>672_bases
ATGAACGACCTCTCCCACCACGCCGAAGCACACGTGTACCGCGAACAGGGTTTCGGCACGCCGTTGCCGCCGCACGGCAA
CCTCGCGCTGCTGATCGTCGACTTCGTCGTCGGGTTCGCCGATCCGGCGACGTTCGGCGGCGGCAACATCGCGCCGGCGA
TCGCGCGCACGACGCAGGCGCTCGCGATCGCGCGGCAACGCGGCTGGCCGGTCGCGCACAGCCGGATCGTCTATGCGGAC
GACGGCAGCGACGACAACGTGTTCTCGCTGAAGGTGCCCGGCATGGCGACGCTGACCGAGCACCACCCGAACAGCGCGAT
CGTGCCGGAACTGACGCCCGCGCACGGCGAGCTCGTCGTGCGCAAGACCGTGCCGTCTGCGTTCTTCGGCACGCAGCTCG
CGCCCTGGCTCGCGCAGCGCGCGGTGCAGACGCTGCTCGTCGCCGGTGCGGTGACGAGCGGCTGCGTGCGCGCGAGCGTC
GTCGACGCGATGTCGCACGGGTTCCGTCCGCTCGTGCTCGCCGATTGCGTCGGCGATCGGGCGATCGCACCGCACGAAGC
GAACCTGTTCGACATGCAGCAGAAATATGCGGCCGTGATGCCGCTCGACGATGCGATCGCGGCGATCGATGCGATGGACG
CGACACATGCGACGCACGCGATCGCGCGCTGA

Upstream 100 bases:

>100_bases
ACATCGACATCCCGCTGCGCCGCTGCACGGTCGAACTCGACGGCCACGCCGTCGTGCGCGACGGGCGCGTGACCGACCAA
CCCGCCTGACGAGACCCACG

Downstream 100 bases:

>100_bases
GCCGATGCGCATCGCGGCCGGGCTATGCCACACCGGTCGCGACGCGCTCGACGCCGCCACCGCCGCCTTTGACGCCGCGT
TTTTGGCCGCCTAGAGTCGA

Product: putative isochorismatase hydrolase

Products: NA

Alternate protein names: N-carbamoylsarcosine amidohydrolase; CSHase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MNDLSHHAEAHVYREQGFGTPLPPHGNLALLIVDFVVGFADPATFGGGNIAPAIARTTQALAIARQRGWPVAHSRIVYAD
DGSDDNVFSLKVPGMATLTEHHPNSAIVPELTPAHGELVVRKTVPSAFFGTQLAPWLAQRAVQTLLVAGAVTSGCVRASV
VDAMSHGFRPLVLADCVGDRAIAPHEANLFDMQQKYAAVMPLDDAIAAIDAMDATHATHAIAR

Sequences:

>Translated_223_residues
MNDLSHHAEAHVYREQGFGTPLPPHGNLALLIVDFVVGFADPATFGGGNIAPAIARTTQALAIARQRGWPVAHSRIVYAD
DGSDDNVFSLKVPGMATLTEHHPNSAIVPELTPAHGELVVRKTVPSAFFGTQLAPWLAQRAVQTLLVAGAVTSGCVRASV
VDAMSHGFRPLVLADCVGDRAIAPHEANLFDMQQKYAAVMPLDDAIAAIDAMDATHATHAIAR
>Mature_223_residues
MNDLSHHAEAHVYREQGFGTPLPPHGNLALLIVDFVVGFADPATFGGGNIAPAIARTTQALAIARQRGWPVAHSRIVYAD
DGSDDNVFSLKVPGMATLTEHHPNSAIVPELTPAHGELVVRKTVPSAFFGTQLAPWLAQRAVQTLLVAGAVTSGCVRASV
VDAMSHGFRPLVLADCVGDRAIAPHEANLFDMQQKYAAVMPLDDAIAAIDAMDATHATHAIAR

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: =3.5.1.59 [H]

Molecular weight: Translated: 23576; Mature: 23576

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLSHHAEAHVYREQGFGTPLPPHGNLALLIVDFVVGFADPATFGGGNIAPAIARTTQA
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAIARQRGWPVAHSRIVYADDGSDDNVFSLKVPGMATLTEHHPNSAIVPELTPAHGELVV
HHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEE
RKTVPSAFFGTQLAPWLAQRAVQTLLVAGAVTSGCVRASVVDAMSHGFRPLVLADCVGDR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
AIAPHEANLFDMQQKYAAVMPLDDAIAAIDAMDATHATHAIAR
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDLSHHAEAHVYREQGFGTPLPPHGNLALLIVDFVVGFADPATFGGGNIAPAIARTTQA
CCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
LAIARQRGWPVAHSRIVYADDGSDDNVFSLKVPGMATLTEHHPNSAIVPELTPAHGELVV
HHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCEEE
RKTVPSAFFGTQLAPWLAQRAVQTLLVAGAVTSGCVRASVVDAMSHGFRPLVLADCVGDR
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
AIAPHEANLFDMQQKYAAVMPLDDAIAAIDAMDATHATHAIAR
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1381445; 8913306 [H]