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The map label for this gene is mdcF [H]

Identifier: 189352719

GI number: 189352719

Start: 821981

End: 822925

Strand: Direct

Name: mdcF [H]

Synonym: BMULJ_03951

Alternate gene names: 189352719

Gene position: 821981-822925 (Clockwise)

Preceding gene: 189352717

Following gene: 189352722

Centisome position: 33.24

GC content: 69.31

Gene sequence:

>945_bases
ATGTCATCGACGATCGAGATTCTGTTGCCCGTGTTCGGGCTGATCGCGGCAGGTTTTTTGTGCCGCAAGCGCGGCGTGCT
CGGTCCGGCGGCCGCGTCGGAGCTGAACCGGTTCGTCGTCTGGCTCGCGCTGCCCGCGCTGCTGTTCCAGATCATGGCGC
AGGCCTCGTGGCATCAGCTCTATCAGCCGGCCTTCGTCGCGACCTTCGCGCTGACCTGCGCGGCCGTGTTCGGCGGCGTG
CTGATATGGCGTGTGCTCGCCGGGCGGCCGCTCGCCGATGCGAGCATCGACGCGATCGCCGCGTCGTATCCGAACACCGG
CTATCTCGGCTTTCCGCTGTGTCTGCTGGCCTTCGGCACCGACAGTCTGACGCCGACCACGATCGCGACGATTCTGGTCG
CCTGCGTGCTGTTCGCCGGCGCGATCGTCGTCATCGAGATCGGGCTGCAGCGCGACCGCGCGCCGCTGAGACTCATGTGG
AAGGTCGTCGGCGCGCTGCTGCGCAATCCGCTGATCGTCGCGCCGCTCGCGGGTGTCTGCGCCGCGGCCGCCCACGTGAC
GCTCGCCGCGCCCGCGCAGACGTTCCTGAAGCTGCTCGGCGCGGCGGCCAGCCCGTGCGCGCTCGTGAGTCTCGGGCTGT
TTCTCGCGGAGAAGCGCGAGGCATCCGGCGACACGCCGCGCGGCAGCATCGCGCTGACCGCGACGAAGCTCTTCGTCCAG
CCCGCGCTCGCATGGTGGCTCGGCGTGCGCGTGTTCGCGCTGCCGCCGGTGCTCGCGCAGATCGCCGTCGTGCTCGCGGC
GCTGCCGACCGGCACGGGGCCTTATATGCTCGCCGAATTCTATGGGCGCGAAGCGCAGGTGACGTCGCGCACGATCCTGC
TGTCGACGATCGGGTCGATCGTGTCCTTGTCGGTGCTGCTTGCGTTCGCGCGGCACGCATCGTAA

Upstream 100 bases:

>100_bases
GAGACAGGCGAAGCGAGCCGTGCTCATCGGCGTGCGCATTGGACTCAGCCGCGCGGAACCATTAAGCTTGCGCGTTCCGG
TTTCACGCAGCGTGTCCAAG

Downstream 100 bases:

>100_bases
GAAAGCGCAGCGGGCGGGCGATCGCGCGTACGGCGCGACGGTCAGTGCGGTTTCGACGCGATACGTGCGTGACGTGCGCA
GCGCGCGGTCCGAATGGAGC

Product: predicted permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSSTIEILLPVFGLIAAGFLCRKRGVLGPAAASELNRFVVWLALPALLFQIMAQASWHQLYQPAFVATFALTCAAVFGGV
LIWRVLAGRPLADASIDAIAASYPNTGYLGFPLCLLAFGTDSLTPTTIATILVACVLFAGAIVVIEIGLQRDRAPLRLMW
KVVGALLRNPLIVAPLAGVCAAAAHVTLAAPAQTFLKLLGAAASPCALVSLGLFLAEKREASGDTPRGSIALTATKLFVQ
PALAWWLGVRVFALPPVLAQIAVVLAALPTGTGPYMLAEFYGREAQVTSRTILLSTIGSIVSLSVLLAFARHAS

Sequences:

>Translated_314_residues
MSSTIEILLPVFGLIAAGFLCRKRGVLGPAAASELNRFVVWLALPALLFQIMAQASWHQLYQPAFVATFALTCAAVFGGV
LIWRVLAGRPLADASIDAIAASYPNTGYLGFPLCLLAFGTDSLTPTTIATILVACVLFAGAIVVIEIGLQRDRAPLRLMW
KVVGALLRNPLIVAPLAGVCAAAAHVTLAAPAQTFLKLLGAAASPCALVSLGLFLAEKREASGDTPRGSIALTATKLFVQ
PALAWWLGVRVFALPPVLAQIAVVLAALPTGTGPYMLAEFYGREAQVTSRTILLSTIGSIVSLSVLLAFARHAS
>Mature_313_residues
SSTIEILLPVFGLIAAGFLCRKRGVLGPAAASELNRFVVWLALPALLFQIMAQASWHQLYQPAFVATFALTCAAVFGGVL
IWRVLAGRPLADASIDAIAASYPNTGYLGFPLCLLAFGTDSLTPTTIATILVACVLFAGAIVVIEIGLQRDRAPLRLMWK
VVGALLRNPLIVAPLAGVCAAAAHVTLAAPAQTFLKLLGAAASPCALVSLGLFLAEKREASGDTPRGSIALTATKLFVQP
ALAWWLGVRVFALPPVLAQIAVVLAALPTGTGPYMLAEFYGREAQVTSRTILLSTIGSIVSLSVLLAFARHAS

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32843; Mature: 32712

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTIEILLPVFGLIAAGFLCRKRGVLGPAAASELNRFVVWLALPALLFQIMAQASWHQL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQPAFVATFALTCAAVFGGVLIWRVLAGRPLADASIDAIAASYPNTGYLGFPLCLLAFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
DSLTPTTIATILVACVLFAGAIVVIEIGLQRDRAPLRLMWKVVGALLRNPLIVAPLAGVC
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHH
AAAAHVTLAAPAQTFLKLLGAAASPCALVSLGLFLAEKREASGDTPRGSIALTATKLFVQ
HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
PALAWWLGVRVFALPPVLAQIAVVLAALPTGTGPYMLAEFYGREAQVTSRTILLSTIGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
VSLSVLLAFARHAS
HHHHHHHHHHHHCC
>Mature Secondary Structure 
SSTIEILLPVFGLIAAGFLCRKRGVLGPAAASELNRFVVWLALPALLFQIMAQASWHQL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YQPAFVATFALTCAAVFGGVLIWRVLAGRPLADASIDAIAASYPNTGYLGFPLCLLAFGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
DSLTPTTIATILVACVLFAGAIVVIEIGLQRDRAPLRLMWKVVGALLRNPLIVAPLAGVC
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHH
AAAAHVTLAAPAQTFLKLLGAAASPCALVSLGLFLAEKREASGDTPRGSIALTATKLFVQ
HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHH
PALAWWLGVRVFALPPVLAQIAVVLAALPTGTGPYMLAEFYGREAQVTSRTILLSTIGSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
VSLSVLLAFARHAS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10858449; 11481430 [H]