| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
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The map label for this gene is ssuA [H]
Identifier: 189352716
GI number: 189352716
Start: 819068
End: 820135
Strand: Reverse
Name: ssuA [H]
Synonym: BMULJ_03948
Alternate gene names: 189352716
Gene position: 820135-819068 (Counterclockwise)
Preceding gene: 189352718
Following gene: 189352715
Centisome position: 33.16
GC content: 67.51
Gene sequence:
>1068_bases ATGCTTCCACTGCGTCTGCTGCGATCGCTGCTGATCGCCTCCGTCTTCGCGCTGCCGGCCGCCGCCGCGCACGCGGACAA ACCCGCCGTCATTCGCATCGGCGTCGCGCAGCAAGGTGCCGGCGATCCGCCGACCTTCGGCGGCTCGTCGGCCGCGACCG TGCAATTGCAGCAGCTCGTCGAGAAGGAATTCGCGGCCGACGGCATCAAGGTGCAGTGGCTGTTCTTCAAGGGCGCCGGC CCGGCCGTCAACGAAGCGATCGCCAACAAGGCGCTCGACTTCGCGTACCAGGGCGACCTGCCCGCCGTGCTCGCGCGCGC CAACGGGCTCAAGACGCATCTGCTGCTCGCCACCAGCGTCCGCTCGGGCGTCAAGATCGCGGTGCCGCCCGATTCCGACA TCAAGTCGATCAAGGACCTGAAGGGCCGCCGCGTCTCGATCTTCCGCGGCACGAACCTGCAGCTCGTCGCCGACAACGCG CTCGCGAAGAACGGGCTCGACGAACGCGACCTGCGCGTGACGAACCTCGACACGGCGAGCGCGCTGGCCGCGCTCGCGTC GAAGGGCATCGACGCGTCGGTGAACGACTATCAGCTGTACAAGCTGCGCGACGCGGGGCTCGCGAAGATCATCTACGAAT CGCAGAACGACGGCCCGCAGTTCACGCGCCAGACACACCTGCTCGTGCTCGACGATTTCGAGCGCGCGCATCCCGACATC GTGCAGCGCGTGGTCGACGCGGTCGTGAAAGGCGCGCGCTGGTCGTCCGACGAAGCGAACCGCGATGCGCTGTTCAAGCT GTGGGCGAAGAGCGGCGTGCCGGTGTCGTCGTGGCAGGCCGACTATGCGAACCAGCGCCTGAAGGATCGCCTGTCGCCGC TGATCGACCCGTTCCTCGTCGCGCGCTATAAGGCCGTCGCGCAGGATGCGCTGCGGCTGAAGCTGATCCGCCAGCCGATC GACGTCGACGGCTGGTTCGAGCCGAAGTATCTCGACAACGCGCTGCGCGCGCAGAAGCTCGAACAGTACTGGCCGCGCTA CGACGCGTCCGGCAAGCCGCTGTCCTGA
Upstream 100 bases:
>100_bases GTTCAAATCGTTGTTTGTCCGTGCCCGGAGCGTCATCGAGAATGACCCGACGGGCTCTCGCCCGGTTTCGTTCCCCTAAC GTTCCCACTTCGATCGATCC
Downstream 100 bases:
>100_bases ACCGGAGCCGCCGATGAGCGACACCGCGATCCCGATCCCGTCGTCCGACCCGCATGCGCTCGGCGCGTCGTCGCGCCGTC GCGCGGCCGTGAAGCGGCTG
Product: sulfonate/nitrate/taurine transport system substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLPLRLLRSLLIASVFALPAAAAHADKPAVIRIGVAQQGAGDPPTFGGSSAATVQLQQLVEKEFAADGIKVQWLFFKGAG PAVNEAIANKALDFAYQGDLPAVLARANGLKTHLLLATSVRSGVKIAVPPDSDIKSIKDLKGRRVSIFRGTNLQLVADNA LAKNGLDERDLRVTNLDTASALAALASKGIDASVNDYQLYKLRDAGLAKIIYESQNDGPQFTRQTHLLVLDDFERAHPDI VQRVVDAVVKGARWSSDEANRDALFKLWAKSGVPVSSWQADYANQRLKDRLSPLIDPFLVARYKAVAQDALRLKLIRQPI DVDGWFEPKYLDNALRAQKLEQYWPRYDASGKPLS
Sequences:
>Translated_355_residues MLPLRLLRSLLIASVFALPAAAAHADKPAVIRIGVAQQGAGDPPTFGGSSAATVQLQQLVEKEFAADGIKVQWLFFKGAG PAVNEAIANKALDFAYQGDLPAVLARANGLKTHLLLATSVRSGVKIAVPPDSDIKSIKDLKGRRVSIFRGTNLQLVADNA LAKNGLDERDLRVTNLDTASALAALASKGIDASVNDYQLYKLRDAGLAKIIYESQNDGPQFTRQTHLLVLDDFERAHPDI VQRVVDAVVKGARWSSDEANRDALFKLWAKSGVPVSSWQADYANQRLKDRLSPLIDPFLVARYKAVAQDALRLKLIRQPI DVDGWFEPKYLDNALRAQKLEQYWPRYDASGKPLS >Mature_355_residues MLPLRLLRSLLIASVFALPAAAAHADKPAVIRIGVAQQGAGDPPTFGGSSAATVQLQQLVEKEFAADGIKVQWLFFKGAG PAVNEAIANKALDFAYQGDLPAVLARANGLKTHLLLATSVRSGVKIAVPPDSDIKSIKDLKGRRVSIFRGTNLQLVADNA LAKNGLDERDLRVTNLDTASALAALASKGIDASVNDYQLYKLRDAGLAKIIYESQNDGPQFTRQTHLLVLDDFERAHPDI VQRVVDAVVKGARWSSDEANRDALFKLWAKSGVPVSSWQADYANQRLKDRLSPLIDPFLVARYKAVAQDALRLKLIRQPI DVDGWFEPKYLDNALRAQKLEQYWPRYDASGKPLS
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081803, Length=194, Percent_Identity=30.4123711340206, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 38799; Mature: 38799
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPLRLLRSLLIASVFALPAAAAHADKPAVIRIGVAQQGAGDPPTFGGSSAATVQLQQLV CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH EKEFAADGIKVQWLFFKGAGPAVNEAIANKALDFAYQGDLPAVLARANGLKTHLLLATSV HHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEEEEHH RSGVKIAVPPDSDIKSIKDLKGRRVSIFRGTNLQLVADNALAKNGLDERDLRVTNLDTAS CCCCEEEECCCCHHHHHHHCCCCEEEEEECCCEEEEECCHHHHCCCCCCCEEEECCCHHH ALAALASKGIDASVNDYQLYKLRDAGLAKIIYESQNDGPQFTRQTHLLVLDDFERAHPDI HHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHCCEEEEEEECCHHCCHHH VQRVVDAVVKGARWSSDEANRDALFKLWAKSGVPVSSWQADYANQRLKDRLSPLIDPFLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARYKAVAQDALRLKLIRQPIDVDGWFEPKYLDNALRAQKLEQYWPRYDASGKPLS HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLPLRLLRSLLIASVFALPAAAAHADKPAVIRIGVAQQGAGDPPTFGGSSAATVQLQQLV CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH EKEFAADGIKVQWLFFKGAGPAVNEAIANKALDFAYQGDLPAVLARANGLKTHLLLATSV HHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHEECCCCHHHHHHCCCCCEEEEEEEHH RSGVKIAVPPDSDIKSIKDLKGRRVSIFRGTNLQLVADNALAKNGLDERDLRVTNLDTAS CCCCEEEECCCCHHHHHHHCCCCEEEEEECCCEEEEECCHHHHCCCCCCCEEEECCCHHH ALAALASKGIDASVNDYQLYKLRDAGLAKIIYESQNDGPQFTRQTHLLVLDDFERAHPDI HHHHHHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCHHCCEEEEEEECCHHCCHHH VQRVVDAVVKGARWSSDEANRDALFKLWAKSGVPVSSWQADYANQRLKDRLSPLIDPFLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARYKAVAQDALRLKLIRQPIDVDGWFEPKYLDNALRAQKLEQYWPRYDASGKPLS HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]