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The map label for this gene is tdcF [C]

Identifier: 189352692

GI number: 189352692

Start: 790685

End: 791008

Strand: Direct

Name: tdcF [C]

Synonym: BMULJ_03924

Alternate gene names: 189352692

Gene position: 790685-791008 (Clockwise)

Preceding gene: 189352690

Following gene: 189352694

Centisome position: 31.97

GC content: 66.67

Gene sequence:

>324_bases
GTGTTCGTTTCCGGCCAGCCGGCGATCGGCGAGGACGGCGAGATCGACGGGCCGGGCGACTTCGACCGTCAGGCCGAGCG
CGCGTTCGGCAACCTCGCGCGCGTGCTGCAGGCGGCCGGCTCCGGCATGGATCGCGTCGTGAAGACGACCGTATTCCTGT
CGTCGATGTCGTATCTCGACAAGATGGTCGATATCCGGCGCAAATGGTTTACCGCGCCGTATCCGGCGGAGAGCCTCGTC
GAGGTGGCGGCGCTGTTTTCGCCGGACGCGCTGATCGAAGTCGAAGCGATTGCGGTCGTCTCGGAGGCGAAGGCGGGCGA
GTGA

Upstream 100 bases:

>100_bases
ACCGAACCGGGAGATCCGCATGAAAATCGAGCAAGTCCACACCAATCCGGACCCTTATGCGCCGTTCCTATTATCACAGG
CAATCCGTGTCGGCGACTTC

Downstream 100 bases:

>100_bases
ACGAACCGCCGTACCAAATGGACGTCGGCGGTTGAGGCGGGCAACGCCCGGCTGCGACAATCGACGTCGAGGCCGATCGA
ATGCGAATCGATCGAAGAAG

Product: YjgF family putative translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MFVSGQPAIGEDGEIDGPGDFDRQAERAFGNLARVLQAAGSGMDRVVKTTVFLSSMSYLDKMVDIRRKWFTAPYPAESLV
EVAALFSPDALIEVEAIAVVSEAKAGE

Sequences:

>Translated_107_residues
MFVSGQPAIGEDGEIDGPGDFDRQAERAFGNLARVLQAAGSGMDRVVKTTVFLSSMSYLDKMVDIRRKWFTAPYPAESLV
EVAALFSPDALIEVEAIAVVSEAKAGE
>Mature_107_residues
MFVSGQPAIGEDGEIDGPGDFDRQAERAFGNLARVLQAAGSGMDRVVKTTVFLSSMSYLDKMVDIRRKWFTAPYPAESLV
EVAALFSPDALIEVEAIAVVSEAKAGE

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Drosophila melanogaster, GI19921376, Length=99, Percent_Identity=38.3838383838384, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 11483; Mature: 11483

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSGQPAIGEDGEIDGPGDFDRQAERAFGNLARVLQAAGSGMDRVVKTTVFLSSMSYLD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KMVDIRRKWFTAPYPAESLVEVAALFSPDALIEVEAIAVVSEAKAGE
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFVSGQPAIGEDGEIDGPGDFDRQAERAFGNLARVLQAAGSGMDRVVKTTVFLSSMSYLD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KMVDIRRKWFTAPYPAESLVEVAALFSPDALIEVEAIAVVSEAKAGE
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]