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The map label for this gene is rfbE [H]

Identifier: 189352671

GI number: 189352671

Start: 763174

End: 764640

Strand: Direct

Name: rfbE [H]

Synonym: BMULJ_03902

Alternate gene names: 189352671

Gene position: 763174-764640 (Clockwise)

Preceding gene: 189352670

Following gene: 189352672

Centisome position: 30.86

GC content: 67.28

Gene sequence:

>1467_bases
ATGGACAAACGCATACTGAAGAACGTATCGATCAATTTCGTCGGGCTGATCCTGCCGACCTTCGTGTCGCTGGTCACGGT
GCCCGCGTATATCCACGCGCTCGGCGTCGAGCGCTACGGCGTCGTCAGTCTCGTGTGGACGCTGATCGGCTATTTCGGGA
TTCTCGATCTCGGCATGAGCATGGCCGCGCAGAACCACATCTCGAAGGCGCTCGCGAGCGGCGATGCGGCCGAAAGCGCG
CGCGTGTTCTGGAGCGCGTTCTGGCTCAATCTCGGCACCGGCATCGCGGGCGGACTGCTGATCTATTTCGGTGCATTCGT
CTACACCGCGTATTTCACGAAGGTGTCGGCCGCGATGCAGCACGAGGTGTATCTCGCGCTGCCGTGGCTCGCGCTCGCGA
TTCCGCTCGCGAACGTGTCGTGGGTGTTCGCCGGCGCGATCAACGGCGCCGAGCGTTTCGGCGTGTTCAACACGAACCAG
ACGATCGGCACGTTCCTGTTCCAGCTGCTGCCGCTCGGCGCGGCCTGGTGGATCGCGCCGAACCTGCAGACGGTGCTCGC
CGCCGCGGTCGTCGCGCGGCTCGTCGCCGCGGTGATGCTCGGCTATGCGAGCGTGCGCGTGCTCGGGATCCGGCGCGTCG
ATCCGCCGCAATGGGGCACCGCGAAAGGACTGTTCAACTTCGGCGGCTGGATGCTGATCGCGAGCACGACGAGCATGATC
GCCGACACGCTCGACCGCGTGATGCTCGGCGCCGGCATGGGCGCGAAGTTCGTCACCTACTACACGGTGCCGCAGAACCT
CGTCACGCGGCTGAACATGCTGCCGAACGCGCTCGTGCGCACGCTGTTCCCGCGCCTGTCCGCGCTCGGCCGCGAGCATG
CCGACACACTTGCGCGCCAGTCGCTCGAATTCCTGAACGGCGTGTTCACGCCGGTCGCGATCGTCGCGATCTTTGCGCTG
GCGCCGTTCCTGACGCTGTGGGTCGGCCCCGATCTGGCCGCCCATTCGGCGCCGGTCGGGCGCGTGCTCGTGGTCGGCGT
GTGGCTCGTCGGTCAGGCGAGCGTCACGCGGATCCTGATCCAGTCGCAGGTCAACCCGGCGCGCGCGGCGCTGGCCGGGC
TCGTCCAGATGCCGTTCTTCGTCGGCGCGCTGTGGCTCGGCATTCATCGCTACGGGCTGATCGGCGCGGCGGTGGTCGTC
GCCGCCCGCGCGCTGGTCGACTACGGCGTGCTGCTCTATCTGTCGGCGATCCGGATGCGCGCGATCGTGCTCGACATGGT
CGCGCACCTCGCGTTCCTGCTCGTGAGCCTCGCGCTTGCGAACGCCTGGCCGGGGCTTGCCGAATCCATCGGCATGTGCG
CGATCGTGCTGACGCTGAACGTCGCCTGGTCGCTCACGATGACGCCGGGGCTGCGCGCGCTGGCGTCCGGCCTGATCGGC
CGTCTCAATGCGAGGAAAACCACATGA

Upstream 100 bases:

>100_bases
GAGAACGGCGAGTACCTCGTGTTCGTCGAGGAAGACGCGCGCGGCAAGGTGCTGATGTATCGCTGGAAACCGTGACGCGC
GCCGTCGACAAGGCACAGGC

Downstream 100 bases:

>100_bases
ATCGCGATCTGGCGGAACACGCCCTTCTCAATGCGGCGCCGGCCGACGCGACGGTCGCGGCCGTCGCCGGCGAAGCGGGC
ACGCTGCGCGCGGTGCCGCG

Product: polysaccharide biosynthesis family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MDKRILKNVSINFVGLILPTFVSLVTVPAYIHALGVERYGVVSLVWTLIGYFGILDLGMSMAAQNHISKALASGDAAESA
RVFWSAFWLNLGTGIAGGLLIYFGAFVYTAYFTKVSAAMQHEVYLALPWLALAIPLANVSWVFAGAINGAERFGVFNTNQ
TIGTFLFQLLPLGAAWWIAPNLQTVLAAAVVARLVAAVMLGYASVRVLGIRRVDPPQWGTAKGLFNFGGWMLIASTTSMI
ADTLDRVMLGAGMGAKFVTYYTVPQNLVTRLNMLPNALVRTLFPRLSALGREHADTLARQSLEFLNGVFTPVAIVAIFAL
APFLTLWVGPDLAAHSAPVGRVLVVGVWLVGQASVTRILIQSQVNPARAALAGLVQMPFFVGALWLGIHRYGLIGAAVVV
AARALVDYGVLLYLSAIRMRAIVLDMVAHLAFLLVSLALANAWPGLAESIGMCAIVLTLNVAWSLTMTPGLRALASGLIG
RLNARKTT

Sequences:

>Translated_488_residues
MDKRILKNVSINFVGLILPTFVSLVTVPAYIHALGVERYGVVSLVWTLIGYFGILDLGMSMAAQNHISKALASGDAAESA
RVFWSAFWLNLGTGIAGGLLIYFGAFVYTAYFTKVSAAMQHEVYLALPWLALAIPLANVSWVFAGAINGAERFGVFNTNQ
TIGTFLFQLLPLGAAWWIAPNLQTVLAAAVVARLVAAVMLGYASVRVLGIRRVDPPQWGTAKGLFNFGGWMLIASTTSMI
ADTLDRVMLGAGMGAKFVTYYTVPQNLVTRLNMLPNALVRTLFPRLSALGREHADTLARQSLEFLNGVFTPVAIVAIFAL
APFLTLWVGPDLAAHSAPVGRVLVVGVWLVGQASVTRILIQSQVNPARAALAGLVQMPFFVGALWLGIHRYGLIGAAVVV
AARALVDYGVLLYLSAIRMRAIVLDMVAHLAFLLVSLALANAWPGLAESIGMCAIVLTLNVAWSLTMTPGLRALASGLIG
RLNARKTT
>Mature_488_residues
MDKRILKNVSINFVGLILPTFVSLVTVPAYIHALGVERYGVVSLVWTLIGYFGILDLGMSMAAQNHISKALASGDAAESA
RVFWSAFWLNLGTGIAGGLLIYFGAFVYTAYFTKVSAAMQHEVYLALPWLALAIPLANVSWVFAGAINGAERFGVFNTNQ
TIGTFLFQLLPLGAAWWIAPNLQTVLAAAVVARLVAAVMLGYASVRVLGIRRVDPPQWGTAKGLFNFGGWMLIASTTSMI
ADTLDRVMLGAGMGAKFVTYYTVPQNLVTRLNMLPNALVRTLFPRLSALGREHADTLARQSLEFLNGVFTPVAIVAIFAL
APFLTLWVGPDLAAHSAPVGRVLVVGVWLVGQASVTRILIQSQVNPARAALAGLVQMPFFVGALWLGIHRYGLIGAAVVV
AARALVDYGVLLYLSAIRMRAIVLDMVAHLAFLLVSLALANAWPGLAESIGMCAIVLTLNVAWSLTMTPGLRALASGLIG
RLNARKTT

Specific function: Could be an O-antigen transporter [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 52208; Mature: 52208

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRILKNVSINFVGLILPTFVSLVTVPAYIHALGVERYGVVSLVWTLIGYFGILDLGMS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MAAQNHISKALASGDAAESARVFWSAFWLNLGTGIAGGLLIYFGAFVYTAYFTKVSAAMQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HEVYLALPWLALAIPLANVSWVFAGAINGAERFGVFNTNQTIGTFLFQLLPLGAAWWIAP
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCC
NLQTVLAAAVVARLVAAVMLGYASVRVLGIRRVDPPQWGTAKGLFNFGGWMLIASTTSMI
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCCCEEEEHHHHHHH
ADTLDRVMLGAGMGAKFVTYYTVPQNLVTRLNMLPNALVRTLFPRLSALGREHADTLARQ
HHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
SLEFLNGVFTPVAIVAIFALAPFLTLWVGPDLAAHSAPVGRVLVVGVWLVGQASVTRILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCHHHHHHHHH
QSQVNPARAALAGLVQMPFFVGALWLGIHRYGLIGAAVVVAARALVDYGVLLYLSAIRMR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVLDMVAHLAFLLVSLALANAWPGLAESIGMCAIVLTLNVAWSLTMTPGLRALASGLIG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
RLNARKTT
HCCCCCCC
>Mature Secondary Structure
MDKRILKNVSINFVGLILPTFVSLVTVPAYIHALGVERYGVVSLVWTLIGYFGILDLGMS
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
MAAQNHISKALASGDAAESARVFWSAFWLNLGTGIAGGLLIYFGAFVYTAYFTKVSAAMQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HEVYLALPWLALAIPLANVSWVFAGAINGAERFGVFNTNQTIGTFLFQLLPLGAAWWIAP
HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCC
NLQTVLAAAVVARLVAAVMLGYASVRVLGIRRVDPPQWGTAKGLFNFGGWMLIASTTSMI
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCHHHCCCEEEEHHHHHHH
ADTLDRVMLGAGMGAKFVTYYTVPQNLVTRLNMLPNALVRTLFPRLSALGREHADTLARQ
HHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
SLEFLNGVFTPVAIVAIFALAPFLTLWVGPDLAAHSAPVGRVLVVGVWLVGQASVTRILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHCHHHHHHHHH
QSQVNPARAALAGLVQMPFFVGALWLGIHRYGLIGAAVVVAARALVDYGVLLYLSAIRMR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIVLDMVAHLAFLLVSLALANAWPGLAESIGMCAIVLTLNVAWSLTMTPGLRALASGLIG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHH
RLNARKTT
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]