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The map label for this gene is yodB [H]

Identifier: 189352612

GI number: 189352612

Start: 695884

End: 696420

Strand: Direct

Name: yodB [H]

Synonym: BMULJ_03843

Alternate gene names: 189352612

Gene position: 695884-696420 (Clockwise)

Preceding gene: 189352610

Following gene: 189352613

Centisome position: 28.14

GC content: 64.99

Gene sequence:

>537_bases
ATGAGAAACATCCTCGCGCAACAGGTGCGCTACAACAAGCCCGCGATCTTCTTCCACTGGGTCATCTTCGTGCTCGTCGC
GCTCGCGTATCTCGCGATCGAAATCCGCGGACCGAAAGGCAGCGACAGCCGCGCGTTCTGGATGAACGTGCATTTCACGG
CGGGCACGCTGGTGCTCGCGCTGTCGGTGCTGCGCGTGCTGTGGCGCGCGATCGGCCGCACGCCGGCGCCCGTCCCGCAG
CCGGCGCTGCTGAAGTGGCTCGCGACGCTCGCGCATATCGCGCTCTACGTATTCATCATCGCGCAGCCGCTGCTCGGGAT
CATGATGGTGAACCTCGGCGGCAAGCCCGTGTCGCTCGACTGGCTCGGCGTGTCGTTCACGCTGTTCGGGCCCGACAAGG
CGCTGAGGCCGACGATCAAGGAAGCGCACGAGCTGATCGGCAATGCGTTCTACTTCGTGATCGGCCTGCATGCGCTGGCC
GCGCTCTATCACCATTTCATCAAGCGCGACGACGTGCTGCGGCGCATGGCGCCCTGA

Upstream 100 bases:

>100_bases
CGTGCGAAACCGCACACGCGTGCGGCTACAATCATGCCAGCGCGGCGGCACCGTACCGGCCGCCGCCTTCATCGATCCCC
GCCATCACACCGAGACGAGC

Downstream 100 bases:

>100_bases
TCCGGTCGCGCCGTACGTGCAAGCTTCCGACGGGGGCGCATCGTTGCGTTGACAACGATGCGCCCCCGCTGCGTTAACGG
CGCCTGCCGCGGCGGCTGGC

Product: putative cytochrome b561

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRNILAQQVRYNKPAIFFHWVIFVLVALAYLAIEIRGPKGSDSRAFWMNVHFTAGTLVLALSVLRVLWRAIGRTPAPVPQ
PALLKWLATLAHIALYVFIIAQPLLGIMMVNLGGKPVSLDWLGVSFTLFGPDKALRPTIKEAHELIGNAFYFVIGLHALA
ALYHHFIKRDDVLRRMAP

Sequences:

>Translated_178_residues
MRNILAQQVRYNKPAIFFHWVIFVLVALAYLAIEIRGPKGSDSRAFWMNVHFTAGTLVLALSVLRVLWRAIGRTPAPVPQ
PALLKWLATLAHIALYVFIIAQPLLGIMMVNLGGKPVSLDWLGVSFTLFGPDKALRPTIKEAHELIGNAFYFVIGLHALA
ALYHHFIKRDDVLRRMAP
>Mature_178_residues
MRNILAQQVRYNKPAIFFHWVIFVLVALAYLAIEIRGPKGSDSRAFWMNVHFTAGTLVLALSVLRVLWRAIGRTPAPVPQ
PALLKWLATLAHIALYVFIIAQPLLGIMMVNLGGKPVSLDWLGVSFTLFGPDKALRPTIKEAHELIGNAFYFVIGLHALA
ALYHHFIKRDDVLRRMAP

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI87082013, Length=173, Percent_Identity=38.728323699422, Blast_Score=111, Evalue=2e-26,
Organism=Escherichia coli, GI1787296, Length=174, Percent_Identity=31.0344827586207, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87081903, Length=175, Percent_Identity=31.4285714285714, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 19976; Mature: 19976

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNILAQQVRYNKPAIFFHWVIFVLVALAYLAIEIRGPKGSDSRAFWMNVHFTAGTLVLA
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHH
LSVLRVLWRAIGRTPAPVPQPALLKWLATLAHIALYVFIIAQPLLGIMMVNLGGKPVSLD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
WLGVSFTLFGPDKALRPTIKEAHELIGNAFYFVIGLHALAALYHHFIKRDDVLRRMAP
EEEEEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNILAQQVRYNKPAIFFHWVIFVLVALAYLAIEIRGPKGSDSRAFWMNVHFTAGTLVLA
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHH
LSVLRVLWRAIGRTPAPVPQPALLKWLATLAHIALYVFIIAQPLLGIMMVNLGGKPVSLD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
WLGVSFTLFGPDKALRPTIKEAHELIGNAFYFVIGLHALAALYHHFIKRDDVLRRMAP
EEEEEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]