| Definition | Burkholderia multivorans ATCC 17616 chromosome 2, complete genome. |
|---|---|
| Accession | NC_010805 |
| Length | 2,473,162 |
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The map label for this gene is b2083 [C]
Identifier: 189352434
GI number: 189352434
Start: 487854
End: 489005
Strand: Reverse
Name: b2083 [C]
Synonym: BMULJ_03653
Alternate gene names: 189352434
Gene position: 489005-487854 (Counterclockwise)
Preceding gene: 189352435
Following gene: 189352430
Centisome position: 19.77
GC content: 63.63
Gene sequence:
>1152_bases ATGAACCTCGCCGACCTGCCGGGCGCCGACCTGGTGCAGAAAACCGTCCTGGCCGACGATCGTGTGCCGCGCGCGATCTA CTCGATTACGCTGAACGGAAAGGACATCTCGCACAAGTTCGACGGCCGGTTGATCTCGATGACGCTGCAGGACAACCGCG GCTTCGAAGCCGACCAGCTCGACATTAGCCTGGACGATTCGGACGGCGCGCTCGAGATTCCGAGCCGTGGCGTGAGATTG AAGGTGGCGATCGGTTGGGCCGGTGCCGCAAACGGCCTCGTCGACAAGGGCGAATTCGTCGTCGACGAGGTGCGGCACAC CGGCACGCCGGACGTGCTCACGATTCGCGCGCGCAGCGTCGATCTGCGTGCAGGCCTGTCGATCAAGAAGGAGCGATCGT GGCACCGTCAGACCGTCGGCGCGATCGTGCGCGCGATCGCGAGCCAGAACAAGGTGGAGGCGCGCATCAGCAAGGCGCTC GACGGCCAGCTCGTCGACCACATCGACCAGACCGCGGAGTCGGACGCGAACCTGCTGTCGCGCCTGGCGAAAATGTTCGA TGCGATCGCGACAGTGAAGAACGGAAAGCTGCTGTTCATCAAGGCCGGTGAGGCGACGACGGCCAGCGGCAAGCCGTTGC CCGCCATCACGATCACGCGCGACGTTGGCGATCGCCACGAGTTCGGCGTCGCCGATCGCGACACGTATTCCGGCGTGCAG GCGTTCTACCTGAACACGCGCACCGCGAAGAAGCAGTCGACCACCGTGAAGCGGCGCAGGCGCCGCACTACGAAGAAGAA GCCGATCGACAAGAGCGGCGACGTGTTGTTCGGCACCGCCGAAAACGTGAAGGTGCTGCGGCACACCTACGCGAACAAGA GCAACGCGACGCGCGCGGCGAAGGCTGAATGGGAGAAGCTACAGCGCGGTGTCGCGGAGTTCAGCATCGTGCTCGCGCTC GGCCGGCCGGAGCTGATGACCGAATTGCCTGTCACCGTGCGCGGTTATAAACGTGTCATCGACGACTGCAAGTGGATCGT CGCGCGCGTTACACATACGCTCGACGGTAACGGCGGATTTACATCGGACCTCGATCTGGAAGTCAAGGCGAGCGAGGTGC CGGAGATCGACACCTCGACCGACATAGAATAG
Upstream 100 bases:
>100_bases GCGCCGCGCGCCGCATCGATTTCACGGTCGCGCTCACGCGCAACGACGACATCGACATGCTCGGCATCGTGACCGACGCG ATCAAGGAGGCGATCTCGCT
Downstream 100 bases:
>100_bases GCGTGTCGCGACTTACGCAGGCTCTGCCCCGAACCATGCGCCCATCTGTTCGCTTCGGGTGTGCCACAGCTTTACATTGT TGAGAATCTTCGACGCAGAT
Product: probable bacteriophage protein D
Products: NA
Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Late Control Gene D Protein; Tail Protein D; Phage-Related Tail Protein; Phage Protein D; Phage Late Control D Protein; Regulator Of Late Gene Expression; Bacteriophage Regulatory Protein; Phage Protein; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Bacteriophage Protein; Fels-2 Prophage Protein; Phage Protein D-Like; Phage Late Control; Gene D Protein; Phage Tail Protein; Phage-Related Late Control Gene Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Phage-Like Tail Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Late Control D Protein; Phage Regulator; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Tail Assembly T; Late Gene Regulator
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MNLADLPGADLVQKTVLADDRVPRAIYSITLNGKDISHKFDGRLISMTLQDNRGFEADQLDISLDDSDGALEIPSRGVRL KVAIGWAGAANGLVDKGEFVVDEVRHTGTPDVLTIRARSVDLRAGLSIKKERSWHRQTVGAIVRAIASQNKVEARISKAL DGQLVDHIDQTAESDANLLSRLAKMFDAIATVKNGKLLFIKAGEATTASGKPLPAITITRDVGDRHEFGVADRDTYSGVQ AFYLNTRTAKKQSTTVKRRRRRTTKKKPIDKSGDVLFGTAENVKVLRHTYANKSNATRAAKAEWEKLQRGVAEFSIVLAL GRPELMTELPVTVRGYKRVIDDCKWIVARVTHTLDGNGGFTSDLDLEVKASEVPEIDTSTDIE
Sequences:
>Translated_383_residues MNLADLPGADLVQKTVLADDRVPRAIYSITLNGKDISHKFDGRLISMTLQDNRGFEADQLDISLDDSDGALEIPSRGVRL KVAIGWAGAANGLVDKGEFVVDEVRHTGTPDVLTIRARSVDLRAGLSIKKERSWHRQTVGAIVRAIASQNKVEARISKAL DGQLVDHIDQTAESDANLLSRLAKMFDAIATVKNGKLLFIKAGEATTASGKPLPAITITRDVGDRHEFGVADRDTYSGVQ AFYLNTRTAKKQSTTVKRRRRRTTKKKPIDKSGDVLFGTAENVKVLRHTYANKSNATRAAKAEWEKLQRGVAEFSIVLAL GRPELMTELPVTVRGYKRVIDDCKWIVARVTHTLDGNGGFTSDLDLEVKASEVPEIDTSTDIE >Mature_383_residues MNLADLPGADLVQKTVLADDRVPRAIYSITLNGKDISHKFDGRLISMTLQDNRGFEADQLDISLDDSDGALEIPSRGVRL KVAIGWAGAANGLVDKGEFVVDEVRHTGTPDVLTIRARSVDLRAGLSIKKERSWHRQTVGAIVRAIASQNKVEARISKAL DGQLVDHIDQTAESDANLLSRLAKMFDAIATVKNGKLLFIKAGEATTASGKPLPAITITRDVGDRHEFGVADRDTYSGVQ AFYLNTRTAKKQSTTVKRRRRRTTKKKPIDKSGDVLFGTAENVKVLRHTYANKSNATRAAKAEWEKLQRGVAEFSIVLAL GRPELMTELPVTVRGYKRVIDDCKWIVARVTHTLDGNGGFTSDLDLEVKASEVPEIDTSTDIE
Specific function: Unknown
COG id: COG3500
COG function: function code R; Phage protein D
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41998; Mature: 41998
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLADLPGADLVQKTVLADDRVPRAIYSITLNGKDISHKFDGRLISMTLQDNRGFEADQL CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEE DISLDDSDGALEIPSRGVRLKVAIGWAGAANGLVDKGEFVVDEVRHTGTPDVLTIRARSV EEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEE DLRAGLSIKKERSWHRQTVGAIVRAIASQNKVEARISKALDGQLVDHIDQTAESDANLLS EECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH RLAKMFDAIATVKNGKLLFIKAGEATTASGKPLPAITITRDVGDRHEFGVADRDTYSGVQ HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCCEE AFYLNTRTAKKQSTTVKRRRRRTTKKKPIDKSGDVLFGTAENVKVLRHTYANKSNATRAA EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHH KAEWEKLQRGVAEFSIVLALGRPELMTELPVTVRGYKRVIDDCKWIVARVTHTLDGNGGF HHHHHHHHHHHHHEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSDLDLEVKASEVPEIDTSTDIE CCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MNLADLPGADLVQKTVLADDRVPRAIYSITLNGKDISHKFDGRLISMTLQDNRGFEADQL CCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEE DISLDDSDGALEIPSRGVRLKVAIGWAGAANGLVDKGEFVVDEVRHTGTPDVLTIRARSV EEEECCCCCEEECCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEE DLRAGLSIKKERSWHRQTVGAIVRAIASQNKVEARISKALDGQLVDHIDQTAESDANLLS EECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH RLAKMFDAIATVKNGKLLFIKAGEATTASGKPLPAITITRDVGDRHEFGVADRDTYSGVQ HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCHHCCCCCCCCCCCEE AFYLNTRTAKKQSTTVKRRRRRTTKKKPIDKSGDVLFGTAENVKVLRHTYANKSNATRAA EEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHH KAEWEKLQRGVAEFSIVLALGRPELMTELPVTVRGYKRVIDDCKWIVARVTHTLDGNGGF HHHHHHHHHHHHHEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSDLDLEVKASEVPEIDTSTDIE CCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA