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The map label for this gene is ydiK [C]

Identifier: 189352364

GI number: 189352364

Start: 418783

End: 419835

Strand: Reverse

Name: ydiK [C]

Synonym: BMULJ_03583

Alternate gene names: 189352364

Gene position: 419835-418783 (Counterclockwise)

Preceding gene: 189352365

Following gene: 189352358

Centisome position: 16.98

GC content: 64.29

Gene sequence:

>1053_bases
ATGGATAGCGGACACGATCATCAAAAATTCTTCTATTTCCTGCTGTTCGCCGTCACCGTCGGACTATGCTGGGTCCTCGC
GCCGTTCTTCGGCGCGGTGTTCTGGGGCACCATTCTCGCGATCCTGTTCCAGCCCGTGCAGCGCTGGCTCGCGGCGCGCT
TCGGCAAGCGCCGCAATCTGGCCGCGCTGTTGACGCTGACGCTGATCATCCTGATCGTGATCCTGCCGCTCGTGTTCGTC
ACCGCGACGCTCGTGCAGGAAATCGCCTACGTGTACCAGGAGCTGAAGGACGCGCAGCCGAATTATTCGAAGTACTTCCA
GGACGTCATCCACGCGCTGCCGACGTCGGTCCAGCATCTGCTTGCGAAATACGGGCTCACCAACATCCCCGGCATCCAGA
AGAAGCTGACCGACGGCGCCGCGGCGATCAGCCAGTTCGCGGCCGCGCAAGCGCTGAGCATCGGGCAGAACACGTTCCAG
TTCATCGTCAGCTTCGGCGTGATGCTCTACATGGTGTTCTTCCTGCTGCGCGACGGCGGCGAGATCGGGCGTCGCGTGCG
CCGCGCGCTACCGCTCGACGAAGAACACAAGAACCTGCTGCTCGCGAAGTTCACGACCGTGGTGCGCGCAACGGTCAAGG
GCAACATCGCGGTCGCGCTCGTGCAGGGCATTCTCGGCGGATTGATCTTCTGGATCCTCGGGATTCAGGGCGTCGTGCTG
TGGGGCGCGCTGATGGCGTTCCTGTCGCTGCTGCCCGCGATCGGCGCGAGCCTCGTGTGGGTGCCGGCCGCGCTCTACTT
CCTCGCGACCGGCGCGGTCTGGAAGTGCGTGATCCTCGTCGCGTTCTGCGTCGGCGTGATCGGCCTCGTCGACAACCTGC
TGCGCCCGATCCTCGTCGGCAAGGACACGAAGATGCCCGACTGGGTCGTGCTGATCTCGACGCTCGGCGGGATGGCGCTG
TTCGGCATCAACGGCTTCGTGATCGGGCCGCTCGTCGCCGCGCTGTTCATGGCGAGCTGGGACATCTACGCGCGCGCCGA
ACAGGAAGCGTGA

Upstream 100 bases:

>100_bases
GCCCTGCGCGCTCGTCCGCGAATCCACGACGTTCGCGAGCCGATCGCACGCCGGGTCACGCGATTCACTACAACGAAGCA
TCAATCTGCACATGTCACCC

Downstream 100 bases:

>100_bases
CGGGCTGTATGGCGCGTTAGCCGGCCGCCCATCACGGATGCGCGATGCGGACGATGACCGGCACAGGCGCACCGCCCGCA
TCGTCCGGCACCGCGAGCGT

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDSGHDHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLTLIILIVILPLVFV
TATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYGLTNIPGIQKKLTDGAAAISQFAAAQALSIGQNTFQ
FIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVL
WGALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIYARAEQEA

Sequences:

>Translated_350_residues
MDSGHDHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLTLIILIVILPLVFV
TATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYGLTNIPGIQKKLTDGAAAISQFAAAQALSIGQNTFQ
FIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVL
WGALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIYARAEQEA
>Mature_350_residues
MDSGHDHQKFFYFLLFAVTVGLCWVLAPFFGAVFWGTILAILFQPVQRWLAARFGKRRNLAALLTLTLIILIVILPLVFV
TATLVQEIAYVYQELKDAQPNYSKYFQDVIHALPTSVQHLLAKYGLTNIPGIQKKLTDGAAAISQFAAAQALSIGQNTFQ
FIVSFGVMLYMVFFLLRDGGEIGRRVRRALPLDEEHKNLLLAKFTTVVRATVKGNIAVALVQGILGGLIFWILGIQGVVL
WGALMAFLSLLPAIGASLVWVPAALYFLATGAVWKCVILVAFCVGVIGLVDNLLRPILVGKDTKMPDWVVLISTLGGMAL
FGINGFVIGPLVAALFMASWDIYARAEQEA

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=353, Percent_Identity=28.0453257790368, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38330; Mature: 38330

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]