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The map label for this gene is ydhM [C]

Identifier: 189351985

GI number: 189351985

Start: 6673

End: 7299

Strand: Direct

Name: ydhM [C]

Synonym: BMULJ_03202

Alternate gene names: 189351985

Gene position: 6673-7299 (Clockwise)

Preceding gene: 189351984

Following gene: 189351986

Centisome position: 0.27

GC content: 66.99

Gene sequence:

>627_bases
ATGAACCCACAGATCGATCCGTCCGTCGAACCGGCCGACTCCGGCGTCCGCGAGCGTCTACTCGACGCCGCCGAGGCACT
GATTTATTCAGGTGGCATCCATGCAACCGGTGTCGATGCGATCGTGAAGCGCTCCGGCGCCGCACGAAAGAGCTTTTATT
CGCATTTCGAATCGAAGGAAGCGCTGGTCGTGGCGGCGCTCGAACGCCGCGACGCGCGCTGGATGCGCTGGTTCGTCGAC
GCGACGCTCGCGCGCGGCAAGTCGCCACGTGCGCAACTGCTCGTCATGTTCGACGTTCTGCGCGTCTGGTTCGCGCAGCC
CGATTTTCACGGCTGCGCGTTTCTGAACACGTCGGGCGAGATCGCCGATGCCGACGATCCGGTACGCGTCGTCGCACGCG
AACACAAGGCGCGCTTGCTTGCATTCGTGCGCGAGCGGCTCGACGCCTATGCGGACGTCGCCGGTATCGAGCGGCGCACG
CTGGCGCGGCTCGCGCGTCAGTGGCTCGTGCTGATCGACGGCGCGATCGGCGTCGCGCTCGTGAGCGGCAACGCCGGCGC
GGCCCGCGATGCGCGCGCCACGGCGGAATTGTTGCTCGATGCCGCGCTGCGGCCATCGACGTCGTAA

Upstream 100 bases:

>100_bases
CGCACACTGGCGTCCCACCGCACCCGCCTTTCCCCTCTCACCACCAAGGTCTCATCGCAAACCGCTTGACGATGGAGAAC
GATCGTTCTACCTTGGCGCA

Downstream 100 bases:

>100_bases
AAGCGAAACCCGGCCGCGCGCGACGCGGCCATCACGTTGAACAGGAGCGTCCGATGTCCGATTCCGTCGAAGTCCGTCCG
CCCGTCCCGCCGTTTACGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR-Family Transcriptional Regulator; TetR Family Regulatory Protein; Regulatory Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Of TetR Family Protein; Transcription Regulator Protein; Transcription Regulator; TetR-Family Protein Transcriptional Regulator; Tetr Family Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Repressor

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNPQIDPSVEPADSGVRERLLDAAEALIYSGGIHATGVDAIVKRSGAARKSFYSHFESKEALVVAALERRDARWMRWFVD
ATLARGKSPRAQLLVMFDVLRVWFAQPDFHGCAFLNTSGEIADADDPVRVVAREHKARLLAFVRERLDAYADVAGIERRT
LARLARQWLVLIDGAIGVALVSGNAGAARDARATAELLLDAALRPSTS

Sequences:

>Translated_208_residues
MNPQIDPSVEPADSGVRERLLDAAEALIYSGGIHATGVDAIVKRSGAARKSFYSHFESKEALVVAALERRDARWMRWFVD
ATLARGKSPRAQLLVMFDVLRVWFAQPDFHGCAFLNTSGEIADADDPVRVVAREHKARLLAFVRERLDAYADVAGIERRT
LARLARQWLVLIDGAIGVALVSGNAGAARDARATAELLLDAALRPSTS
>Mature_208_residues
MNPQIDPSVEPADSGVRERLLDAAEALIYSGGIHATGVDAIVKRSGAARKSFYSHFESKEALVVAALERRDARWMRWFVD
ATLARGKSPRAQLLVMFDVLRVWFAQPDFHGCAFLNTSGEIADADDPVRVVAREHKARLLAFVRERLDAYADVAGIERRT
LARLARQWLVLIDGAIGVALVSGNAGAARDARATAELLLDAALRPSTS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22707; Mature: 22707

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQIDPSVEPADSGVRERLLDAAEALIYSGGIHATGVDAIVKRSGAARKSFYSHFESKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC
ALVVAALERRDARWMRWFVDATLARGKSPRAQLLVMFDVLRVWFAQPDFHGCAFLNTSGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
IADADDPVRVVAREHKARLLAFVRERLDAYADVAGIERRTLARLARQWLVLIDGAIGVAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VSGNAGAARDARATAELLLDAALRPSTS
EECCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNPQIDPSVEPADSGVRERLLDAAEALIYSGGIHATGVDAIVKRSGAARKSFYSHFESKE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCC
ALVVAALERRDARWMRWFVDATLARGKSPRAQLLVMFDVLRVWFAQPDFHGCAFLNTSGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCC
IADADDPVRVVAREHKARLLAFVRERLDAYADVAGIERRTLARLARQWLVLIDGAIGVAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
VSGNAGAARDARATAELLLDAALRPSTS
EECCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA