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The map label for this gene is traN [H]

Identifier: 189184822

GI number: 189184822

Start: 1949647

End: 1951341

Strand: Direct

Name: traN [H]

Synonym: OTT_1915

Alternate gene names: 189184822

Gene position: 1949647-1951341 (Clockwise)

Preceding gene: 189184821

Following gene: 189184823

Centisome position: 97.05

GC content: 33.63

Gene sequence:

>1695_bases
ATGAGATTATTATCTATATTAACTTTAATAACGCTCAATATTAGCAGTTGTATAGCTTCAATGCAAAGCAGTTATAATGA
AGCTAAAAACTATAATGTAAATCTTGGAAATTCTTCAAATACACAAGAATTATTTCATCAAGGTAGTAATGTCAATTATC
CTAACAATGATGAGGATTTAACCTACCATGGCCGTAATCAGCTTGGTACAGAAAGTGGTGCAATGTTATTTCAAGCTGAA
AACAGTAAAAACAACGCCTTAACTCAACATAATATCAATGATCAAAATTATATGATAGCTAATTCAATGAGAATTGAATC
TGATCCTTTAAGCGCACTTGATAGCAGTAACTTCGTAACTCAGACAAGTACAACTAATACTGAAATTATTCAAAGTTGTA
CTGAAGGCAGTAATTTTAACATTGAACTTATTCGAGAATTGAATGTTGAGTGCAGATTAGATAATGTATGGCTTTCTTGG
CAAAACCGGCAAATGGAATTTGCAACAAAAGAAATAAAGGAGAATCATAGTAATTGGCTTAAGAGTCGTAGCGATGTCTA
TGATGATGAATCAGGTGCACAAATATACTGCCTAGTAGATGATCCCGAAGCAATTGAAAGACAAATGAAATGGGCTATTG
TTAATAGGCTCGGTGTATCTACACAGCATATTGGTAGAAATTTTTTATTACATGAAAAAAATGAAATATGTATACTTCAC
TATGACTACAGAGATAAGACTCAAGAACTAAGGGAAGTAGCAGAATATTGGCAAGTTTTAACCCCTGAACTTGAGCAATT
AACAGAAAGTAACGAATGCTATGAGGTCAATAGAATCAACTATGAGAGTGGTGATAGAGTATTTTTTGACAAGTTTAAAG
TCAATCGTCCATATTGGAAACAAAAGATTGTTTTTTCATGTACTAGCGATCCAAAAGATGGCTGCAAACACCTTAAAATT
CAAAATTGTGAGTTAAAAAACAGCACTTGCCAAAAATCAGTAGCAAATATTTGTTTACTATGGCAGCACGATTATAGCTG
TTCAACTGAGAAGCAAACAATGCTACACTCATCGTTGCGTAACAACTCGATCTTTTGTTTAGGAGGTAATTGCAACACTC
CAACTATTATACCAAACAGGGATATAGCTAAAGTAGCTCATCTAGCAATGCTAAATCAGATGAGCAAAGATATTAAAACA
AATCCTGTTTCTGTATTTTCAGGTAAACATCGAAAATGCAAAAAAGACGTATTTAGTTTTTTGAATTGCTGCTCTTCAAT
GACTGGCTGGGGGCGTGATATAGGCTTATCGCAATGCAAATCTAAGGAACAAGAATTAGCTCTATATAGAAAAAAAGGTT
ATTGCTACTATATCGGTACCTACTGTTCTTCAAGAATTCCGATATTGGGTATTTGCTTAGCTAGAAAGTCTACTTATTGC
TGCTTTCAGTCGAAACTTGCTAGAATTTTTCAGGAAGAAGCAAGAAAACAGCTAAAAATGAACTTTGGAACACCTGAATG
TCCAAAGTGTAGAGGACTAACTGTTGAAGAATTACAAAAAGTTGATTTCACTAAAATCAATATGGATGAACTATTTGGCG
ATATACTCACTAAGGCTCAAAACAGCATGAACAAAGACATTATTGCAGGCATCAAAGATAAAGTTCATCGTATGCAACAA
AACAGATCTTATTGA

Upstream 100 bases:

>100_bases
CAGTGATAGTAATAGATGATAAAAAAAGAGGATTAACCAAGAAATTAACTGGCCATATTCCTTTAGCAAGTGCATTAGAA
ATTATGAATGAGAATACTCC

Downstream 100 bases:

>100_bases
GGTACTTATTGAACTTGAAGAGTTGTAGTAATTGTGATTACTATATAATTAGTAATCATTATATTATATATTGCTTTGTA
CTCATATTTTAATATATAAT

Product: putative conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MRLLSILTLITLNISSCIASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLSW
QNRQMEFATKEIKENHSNWLKSRSDVYDDESGAQIYCLVDDPEAIERQMKWAIVNRLGVSTQHIGRNFLLHEKNEICILH
YDYRDKTQELREVAEYWQVLTPELEQLTESNECYEVNRINYESGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
NRSY

Sequences:

>Translated_564_residues
MRLLSILTLITLNISSCIASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLSW
QNRQMEFATKEIKENHSNWLKSRSDVYDDESGAQIYCLVDDPEAIERQMKWAIVNRLGVSTQHIGRNFLLHEKNEICILH
YDYRDKTQELREVAEYWQVLTPELEQLTESNECYEVNRINYESGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
NRSY
>Mature_564_residues
MRLLSILTLITLNISSCIASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDLTYHGRNQLGTESGAMLFQAE
NSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVTQTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLSW
QNRQMEFATKEIKENHSNWLKSRSDVYDDESGAQIYCLVDDPEAIERQMKWAIVNRLGVSTQHIGRNFLLHEKNEICILH
YDYRDKTQELREVAEYWQVLTPELEQLTESNECYEVNRINYESGDRVFFDKFKVNRPYWKQKIVFSCTSDPKDGCKHLKI
QNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLRNNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKT
NPVSVFSGKHRKCKKDVFSFLNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
CFQSKLARIFQEEARKQLKMNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQNSMNKDIIAGIKDKVHRMQQ
NRSY

Specific function: Essential for F plasmid conjugative transfer. May interact with the recipient cell surface to stabilize mating pairs initiated by F-pili. May interact with traG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009726
- InterPro:   IPR014121 [H]

Pfam domain/function: PF06986 TraN [H]

EC number: NA

Molecular weight: Translated: 64936; Mature: 64936

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSILTLITLNISSCIASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLSWQNRQMEFATKEIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH
KSRSDVYDDESGAQIYCLVDDPEAIERQMKWAIVNRLGVSTQHIGRNFLLHEKNEICILH
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCEEEEE
YDYRDKTQELREVAEYWQVLTPELEQLTESNECYEVNRINYESGDRVFFDKFKVNRPYWK
ECCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHH
QKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLR
CEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
NNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSF
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
HHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHH
CFQSKLARIFQEEARKQLKMNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQ
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHCCCEECCHHHHHHHHHHHHH
NSMNKDIIAGIKDKVHRMQQNRSY
HHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRLLSILTLITLNISSCIASMQSSYNEAKNYNVNLGNSSNTQELFHQGSNVNYPNNDEDL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCE
TYHGRNQLGTESGAMLFQAENSKNNALTQHNINDQNYMIANSMRIESDPLSALDSSNFVT
EECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCEEEECCEEECCCCHHHCCCCCCEE
QTSTTNTEIIQSCTEGSNFNIELIRELNVECRLDNVWLSWQNRQMEFATKEIKENHSNWL
ECCCCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHH
KSRSDVYDDESGAQIYCLVDDPEAIERQMKWAIVNRLGVSTQHIGRNFLLHEKNEICILH
HHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHCCCCEEECCCCEEEEE
YDYRDKTQELREVAEYWQVLTPELEQLTESNECYEVNRINYESGDRVFFDKFKVNRPYWK
ECCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCEEEECCCCCCCCEEEEEEEECCCCHHH
QKIVFSCTSDPKDGCKHLKIQNCELKNSTCQKSVANICLLWQHDYSCSTEKQTMLHSSLR
CEEEEEECCCCHHHHHCCEEECCCCCCHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHC
NNSIFCLGGNCNTPTIIPNRDIAKVAHLAMLNQMSKDIKTNPVSVFSGKHRKCKKDVFSF
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LNCCSSMTGWGRDIGLSQCKSKEQELALYRKKGYCYYIGTYCSSRIPILGICLARKSTYC
HHHHHHCCCCCCCCCHHHHHCHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEHHCCCHHH
CFQSKLARIFQEEARKQLKMNFGTPECPKCRGLTVEELQKVDFTKINMDELFGDILTKAQ
HHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHCCCEECCHHHHHHHHHHHHH
NSMNKDIIAGIKDKVHRMQQNRSY
HHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1593622; 7915817; 2050638 [H]