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The map label for this gene is traC [H]

Identifier: 189184818

GI number: 189184818

Start: 1945791

End: 1947593

Strand: Direct

Name: traC [H]

Synonym: OTT_1911

Alternate gene names: 189184818

Gene position: 1945791-1947593 (Clockwise)

Preceding gene: 189184817

Following gene: 189184820

Centisome position: 96.85

GC content: 36.22

Gene sequence:

>1803_bases
GTGAACGCAAGCATACATAAGGATTTTGATCGAGAAAGATTTTCTAAACACTTTGTCTATGAATCATATGATGATGAGAC
TCAGCTATTCTTTAATCGTTGTTCAATAGGCTTTGTATTGCTTGCATGCCCATTGGCTGAAGCTAGTGTTTCGGCTCAAA
ATGAAATTGCTGAATTTCTGAAAAGCGATGAAAATTTACCTGCTGAAAGTAGCCTTCAAGTATTGATGATTGGTAGTAAT
AATATAGAGAATTTTTTAAGCAACTGGCAGTCATATCGTAAAGGAGAGATATTTATTGAGTTAGCAAATAAAAGAACAGA
GTTTTTGCGTGATCAAGCTCAAAAAGTAGGTTCTATAAAGGATGTAGTATTGTTAATTTCAGTTACTATACCTAATTTAA
ATGCAAATATCGATGATATGATTCGCAGACGAGATGCTTTAAAAGATACGTTTAGGTCAATTGGATTAAGCACTGAAAAT
GTGAATGCGCAGCAATTATTAAAGTTTCTGAGAGTAATATTTGGCTGGCCTGAAGAAGAACATTCAAATATTAACCAGTA
TGAAATATTGTCTGAACAAATTCTAAGTGGAGATTTTTCGTTATTTGAGAATGATGATTGTGTAAATGTAAATGATGATC
AAATATTTATCAGTCTAGAAGCAAGAAAGAGGCCTGCAGAGTGGAAATTATCTGCTATGGATCTGTTTTTAGGTAATGAA
ATGCGTCGTGATGAATATATAAAATCAAATTTCCTGATTCATTTTGGTCTGCAAATTTTACCAAATCAAGCGATGGAAAG
GACTGCTGCCATAACTAAAAGAGAAGCGCTAGAAAGAAATATTAATGCGGGAATGGGTAAATTTTTTCCTGACATACAAC
AAGAAGCTGCTGATTTAGCTGGTGTAGTAGCTGCTTTACAGAGTGGTGATAGAGTCGTTAATATTCACTTCAATGTTATT
ATGTTTGACAAAATAAAAAAAGCTAAGCAATCTGCATCGGCCTTTTGTTCGATGTTAAGGCGCAGTGGATGGTATTTTGT
GCCATGTAAATATGATCATGTGGCCGTGTTACTAGCTGCACTACCAATGCAATTAGTTGAACAAGGCCCAAAAGGTATAT
TGGGTCAAAAAACATCAGGAGTTGGAGTAGCACTTTCTAGCTTAGGTAGAGGCATAAAAACTGTTTCTGTAGAGAGTAAA
GTATTATTGCCAATCATTAGTGAATGGAAAGGTGATTTAAGCTCTCCAGGTATGTTGCTAGCTGGAAGACGAGGTCAAAT
AATGTACTGGTCGCCTTTTGGTGGAGCTTTATTACCTGCGTTAAATAAGCATGGAGTAGCTCCAAATGAGAACTTTAACC
TTTGTATAGCTGGAGTTCCAGGCTCTGGAAAATCTGTTTTTATGCAAGAATTAATGCTATCTGTTCTAGGAGTTGGTGGT
AAAGTTTTTGTTCTTGATTATGGAAGATCATTTAAGCGTACATGCTTGATTCTAGGCGGCAGCTACATAGAATTTGACAT
GAAAAATCCTGTATCAATTAATCCATTTTCAGAGGTGCCAGAGGATGATAGTGCAAAGTCTATAGAGGCTAGATCAGACT
TTTTATCTAACTTTCCATCTATTTTAGCTACTATGGCAGCTCCACAGTATGGAACAAGCGATCTACAACAACCAATGCTA
CAGAGAGCTTTAATATCTGTGCTATTCTTCCTCATATATAGCATGTGCTCCTCCAACTTCAGCTTCAACTTCAGCACCAG
CTTCACCAGCTTCTGCTACATCAGTGCGTTGAATTTTTGTTAA

Upstream 100 bases:

>100_bases
AGGCAAGCTAAAGCTATTCAAAGCGTAGCTGTTGTTAATAAGTCGCCGAAAAAACCAAAAAAATATCTTATTAATTTATT
TAAATCAAAACAGAGTCAAG

Downstream 100 bases:

>100_bases
ATCATCGTTATCTAAATTCTCTAATATCATAAACCTTACTTCTGGTGGCAAGTGAGACCAAGATGTCTGACTTTTTTGAG
AAGCGTCCTGATTGGATTCA

Product: putative conjugative transfer protein TraC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIISEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QRALISVLFFLIYSMCSSNFSFNFSTSFTSFCYISALNFC

Sequences:

>Translated_600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIISEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QRALISVLFFLIYSMCSSNFSFNFSTSFTSFCYISALNFC
>Mature_600_residues
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFLKSDENLPAESSLQVLMIGSN
NIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIKDVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTEN
VNAQQLLKFLRVIFGWPEEEHSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLAGVVAALQSGDRVVNIHFNVI
MFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAALPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESK
VLLPIISEWKGDLSSPGMLLAGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
KVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPSILATMAAPQYGTSDLQQPML
QRALISVLFFLIYSMCSSNFSFNFSTSFTSFCYISALNFC

Specific function: Required for the assembly of mature F-pilin subunits into extended F pili [H]

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002789
- InterPro:   IPR014117 [H]

Pfam domain/function: PF01935 DUF87 [H]

EC number: NA

Molecular weight: Translated: 66986; Mature: 66986

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFL
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH
KSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIK
HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHH
DVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVNAQQLLKFLRVIFGWPEEE
HEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH
HSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
HCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCH
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLA
HHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHH
GVVAALQSGDRVVNIHFNVIMFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAA
HHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
LPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIISEWKGDLSSPGMLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEE
AGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
ECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPS
EEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ILATMAAPQYGTSDLQQPMLQRALISVLFFLIYSMCSSNFSFNFSTSFTSFCYISALNFC
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNASIHKDFDRERFSKHFVYESYDDETQLFFNRCSIGFVLLACPLAEASVSAQNEIAEFL
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHH
KSDENLPAESSLQVLMIGSNNIENFLSNWQSYRKGEIFIELANKRTEFLRDQAQKVGSIK
HCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHCCHH
DVVLLISVTIPNLNANIDDMIRRRDALKDTFRSIGLSTENVNAQQLLKFLRVIFGWPEEE
HEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHH
HSNINQYEILSEQILSGDFSLFENDDCVNVNDDQIFISLEARKRPAEWKLSAMDLFLGNE
HCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCH
MRRDEYIKSNFLIHFGLQILPNQAMERTAAITKREALERNINAGMGKFFPDIQQEAADLA
HHHHHHHHHCEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHH
GVVAALQSGDRVVNIHFNVIMFDKIKKAKQSASAFCSMLRRSGWYFVPCKYDHVAVLLAA
HHHHHHHCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
LPMQLVEQGPKGILGQKTSGVGVALSSLGRGIKTVSVESKVLLPIISEWKGDLSSPGMLL
HHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEE
AGRRGQIMYWSPFGGALLPALNKHGVAPNENFNLCIAGVPGSGKSVFMQELMLSVLGVGG
ECCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCC
KVFVLDYGRSFKRTCLILGGSYIEFDMKNPVSINPFSEVPEDDSAKSIEARSDFLSNFPS
EEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHH
ILATMAAPQYGTSDLQQPMLQRALISVLFFLIYSMCSSNFSFNFSTSFTSFCYISALNFC
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2265751; 7915817; 1355084 [H]