| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is yadD [C]
Identifier: 189184807
GI number: 189184807
Start: 1937340
End: 1937630
Strand: Direct
Name: yadD [C]
Synonym: OTT_1900
Alternate gene names: 189184807
Gene position: 1937340-1937630 (Clockwise)
Preceding gene: 189184805
Following gene: 189184809
Centisome position: 96.43
GC content: 31.27
Gene sequence:
>291_bases ATGCTCGAATATATGCTAAAGCACATTCATCAACGAGATATGTTAAAGCTTTGGGAAGAGTTTTTAATAAAGTTCAAACA TGGTTTAATACTTGATAAAGAAAAAGGTAATAGTATGAGAACTATTGCTGCAAAATATATTGATGAAGGCATAGCTAAAG GCAGAGCTGAAGCTGCGCAAGAGCTTACAAGGAACTTATTAAAAGCTGGCTTTTTAGTTGAATTTATTTCTGAAACTACT GGGTTATCAAAAGAAGAAGTGGTTAATGTAAAAAATAACATGGATTATTAA
Upstream 100 bases:
>100_bases CTATTAGCCTTAGGAACGCTACTGTATACTAGCTTTCTTTTGTGCTATTGCTATAATCTTTTATTTTATTGCAATTTCAC TTATTTTTATCATACAAGGA
Downstream 100 bases:
>100_bases CTTTTAAATTAATAATCCACTAACTTAAGTTTTTTGAGCAATGTATATCCCCAAACCTGACTTCCAAACCACTTTACCAA CTCTGGGTTGGCATGTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase And Inactivated Derivative
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT GLSKEEVVNVKNNMDY
Sequences:
>Translated_96_residues MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT GLSKEEVVNVKNNMDY >Mature_96_residues MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT GLSKEEVVNVKNNMDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11144; Mature: 11144
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHH ELTRNLLKAGFLVEFISETTGLSKEEVVNVKNNMDY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC >Mature Secondary Structure MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHH ELTRNLLKAGFLVEFISETTGLSKEEVVNVKNNMDY HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA