Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is yadD [C]

Identifier: 189184807

GI number: 189184807

Start: 1937340

End: 1937630

Strand: Direct

Name: yadD [C]

Synonym: OTT_1900

Alternate gene names: 189184807

Gene position: 1937340-1937630 (Clockwise)

Preceding gene: 189184805

Following gene: 189184809

Centisome position: 96.43

GC content: 31.27

Gene sequence:

>291_bases
ATGCTCGAATATATGCTAAAGCACATTCATCAACGAGATATGTTAAAGCTTTGGGAAGAGTTTTTAATAAAGTTCAAACA
TGGTTTAATACTTGATAAAGAAAAAGGTAATAGTATGAGAACTATTGCTGCAAAATATATTGATGAAGGCATAGCTAAAG
GCAGAGCTGAAGCTGCGCAAGAGCTTACAAGGAACTTATTAAAAGCTGGCTTTTTAGTTGAATTTATTTCTGAAACTACT
GGGTTATCAAAAGAAGAAGTGGTTAATGTAAAAAATAACATGGATTATTAA

Upstream 100 bases:

>100_bases
CTATTAGCCTTAGGAACGCTACTGTATACTAGCTTTCTTTTGTGCTATTGCTATAATCTTTTATTTTATTGCAATTTCAC
TTATTTTTATCATACAAGGA

Downstream 100 bases:

>100_bases
CTTTTAAATTAATAATCCACTAACTTAAGTTTTTTGAGCAATGTATATCCCCAAACCTGACTTCCAAACCACTTTACCAA
CTCTGGGTTGGCATGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivative

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT
GLSKEEVVNVKNNMDY

Sequences:

>Translated_96_residues
MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT
GLSKEEVVNVKNNMDY
>Mature_96_residues
MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQELTRNLLKAGFLVEFISETT
GLSKEEVVNVKNNMDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11144; Mature: 11144

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHH
ELTRNLLKAGFLVEFISETTGLSKEEVVNVKNNMDY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLEYMLKHIHQRDMLKLWEEFLIKFKHGLILDKEKGNSMRTIAAKYIDEGIAKGRAEAAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHCCHHHHHH
ELTRNLLKAGFLVEFISETTGLSKEEVVNVKNNMDY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA