Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189184748

Identifier: 189184748

GI number: 189184748

Start: 1875085

End: 1875672

Strand: Direct

Name: 189184748

Synonym: OTT_1841

Alternate gene names: NA

Gene position: 1875085-1875672 (Clockwise)

Preceding gene: 189184744

Following gene: 189184750

Centisome position: 93.33

GC content: 28.06

Gene sequence:

>588_bases
ATGAAAAAATGTATTACAACAGTATACTATTTAATAGATAATTTTTGCAAGATATATCAAGAGTATGAAAGAAATAGATT
AATACCAAGTAGTAATCAAAGGAACAGAGATGGAAAGTTATCCTTAGCTGAGTTATTAACAATAGTGATATATTTTTATT
TATCTCCATGCAAGGATTTTAAAAATTATTATCTATATTACTTGCATTATAAGTATAAAGGATACTTTTGTTTACCAAGT
TATAGTAGAATAATACAACTATGGCATATAATATTGCTACCGCTAGCTGCATTAATGCATTATCTGAAAGGAGAAGAGAC
TGATATATATTACATCGATTCTACAAAGTTAGCAATTTGTCATAATAAACGTACTTCCAGCAATAGAGTTTTTAACAGAA
TTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTTAGGCTTTAAGCTACATCTTGTAATTAATAATAAAGGCGAAATA
ATGTCAGTTAAATCTACTAAAGGCAATAAAAGCGATCTATCTATAGCTTCAGTTATTTCTCAAGGCTTATCTGGTAAATT
GTTTGCTGACAAAGCCTTACATATCTAA

Upstream 100 bases:

>100_bases
TTAGGATAAGGAAAAGTATGAGAAGCAGTGAATAAAAGGTATACAAAGAAAGGATGTTGAGTTATAAAGAAAATTTAAAT
AAAAACAAAACAACCCCAAC

Downstream 100 bases:

>100_bases
AGCATTATTTCATCAACTGTTCTCCAATGGTCTACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTAG
ACATAGAAGATAAGAAGTTA

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase And Inactivated Derivative; IS4 Family Transposase; Transposase IS4 Family; Protease; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS
YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI
MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI

Sequences:

>Translated_195_residues
MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS
YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI
MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI
>Mature_195_residues
MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDFKNYYLYYLHYKYKGYFCLPS
YSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAICHNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEI
MSVKSTKGNKSDLSIASVISQGLSGKLFADKALHI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22791; Mature: 22791

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
KNYYLYYLHYKYKGYFCLPSYSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAIC
CCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
HNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEIMSVKSTKGNKSDLSIASVIS
ECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHH
QGLSGKLFADKALHI
CCCCCCEECCCCCCC
>Mature Secondary Structure
MKKCITTVYYLIDNFCKIYQEYERNRLIPSSNQRNRDGKLSLAELLTIVIYFYLSPCKDF
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH
KNYYLYYLHYKYKGYFCLPSYSRIIQLWHIILLPLAALMHYLKGEETDIYYIDSTKLAIC
CCEEEEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEE
HNKRTSSNRVFNRISKIGKSSYGWFLGFKLHLVINNKGEIMSVKSTKGNKSDLSIASVIS
ECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHH
QGLSGKLFADKALHI
CCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA