| Definition | Orientia tsutsugamushi str. Ikeda, complete genome. |
|---|---|
| Accession | NC_010793 |
| Length | 2,008,987 |
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The map label for this gene is 189184656
Identifier: 189184656
GI number: 189184656
Start: 1775964
End: 1776116
Strand: Direct
Name: 189184656
Synonym: OTT_1749
Alternate gene names: NA
Gene position: 1775964-1776116 (Clockwise)
Preceding gene: 189184655
Following gene: 189184657
Centisome position: 88.4
GC content: 34.64
Gene sequence:
>153_bases ATGGAAAGTACTGCTGCCATAACTAAAAGAGAGGCACTAGAAAGAAATATTAATGCAGAAATGGGTAAATTTTTTCCTGA TATACAGCAAGAAGTTGCTGATTTAGCAGATGTAGTAGCTACTTTACAGAGCGGTGATTATTATGTTGGATAA
Upstream 100 bases:
>100_bases TGTCATGTATTTGCTTTTAGACAATGAAATGCGTTGTGATGAATATATAAAATCAAATTTCCTGATTCATTTTTGTCTGT AAATTCTACCAAATCAAGCG
Downstream 100 bases:
>100_bases AACAAAAAAAGCTAAGCAATATGCATCAGCATTTTGTTCGATGTTAAGACGCAGTAAATGGTATTTTGTTCTATGCAAAT ATGATTATGTAGCTATGTTA
Product: putative conjugative transfer protein TraC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MESTAAITKREALERNINAEMGKFFPDIQQEVADLADVVATLQSGDYYVG
Sequences:
>Translated_50_residues MESTAAITKREALERNINAEMGKFFPDIQQEVADLADVVATLQSGDYYVG >Mature_50_residues MESTAAITKREALERNINAEMGKFFPDIQQEVADLADVVATLQSGDYYVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5507; Mature: 5507
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTAAITKREALERNINAEMGKFFPDIQQEVADLADVVATLQSGDYYVG CCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MESTAAITKREALERNINAEMGKFFPDIQQEVADLADVVATLQSGDYYVG CCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA